Protein–RNA interactions for Protein: Q921M3

Sf3b3, Splicing factor 3B subunit 3, mousemouse

Known RBP Predictions only

Length 1,217 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b3Q921M3 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Sf3b3Q921M3 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
Sf3b3Q921M3 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC20.44■□□□□ 0.86
Sf3b3Q921M3 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC20.44■□□□□ 0.86
Sf3b3Q921M3 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC20.44■□□□□ 0.86
Sf3b3Q921M3 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Sf3b3Q921M3 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Sf3b3Q921M3 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Sf3b3Q921M3 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Sf3b3Q921M3 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
Sf3b3Q921M3 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Sf3b3Q921M3 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Sf3b3Q921M3 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC20.43■□□□□ 0.86
Sf3b3Q921M3 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC20.43■□□□□ 0.86
Sf3b3Q921M3 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Sf3b3Q921M3 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
Sf3b3Q921M3 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
Sf3b3Q921M3 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Sf3b3Q921M3 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Sf3b3Q921M3 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Sf3b3Q921M3 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
Sf3b3Q921M3 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Sf3b3Q921M3 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC20.42■□□□□ 0.86
Sf3b3Q921M3 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Sf3b3Q921M3 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Sf3b3Q921M3 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Sf3b3Q921M3 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Sf3b3Q921M3 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Sf3b3Q921M3 AL590614.2-201ENSMUST00000225374 1937 ntBASIC20.42■□□□□ 0.86
Sf3b3Q921M3 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
Sf3b3Q921M3 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Sf3b3Q921M3 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Sf3b3Q921M3 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Sf3b3Q921M3 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Sf3b3Q921M3 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
Sf3b3Q921M3 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Sf3b3Q921M3 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Sf3b3Q921M3 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Sf3b3Q921M3 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC20.41■□□□□ 0.86
Sf3b3Q921M3 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC20.41■□□□□ 0.86
Sf3b3Q921M3 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Sf3b3Q921M3 AC108846.1-201ENSMUST00000214531 513 ntBASIC20.41■□□□□ 0.86
Sf3b3Q921M3 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC20.41■□□□□ 0.86
Sf3b3Q921M3 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Sf3b3Q921M3 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Sf3b3Q921M3 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC20.41■□□□□ 0.86
Sf3b3Q921M3 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Sf3b3Q921M3 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Sf3b3Q921M3 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Sf3b3Q921M3 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC20.4■□□□□ 0.86
Sf3b3Q921M3 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC20.4■□□□□ 0.86
Sf3b3Q921M3 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Sf3b3Q921M3 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC20.4■□□□□ 0.86
Sf3b3Q921M3 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Sf3b3Q921M3 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC20.4■□□□□ 0.86
Sf3b3Q921M3 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
Sf3b3Q921M3 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Sf3b3Q921M3 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC20.4■□□□□ 0.86
Sf3b3Q921M3 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Sf3b3Q921M3 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
Sf3b3Q921M3 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Sf3b3Q921M3 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Sf3b3Q921M3 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC20.4■□□□□ 0.86
Sf3b3Q921M3 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Sf3b3Q921M3 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Sf3b3Q921M3 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Sf3b3Q921M3 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Sf3b3Q921M3 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC20.4■□□□□ 0.86
Sf3b3Q921M3 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC20.39■□□□□ 0.86
Sf3b3Q921M3 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.86
Sf3b3Q921M3 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Sf3b3Q921M3 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Sf3b3Q921M3 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Sf3b3Q921M3 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC20.39■□□□□ 0.85
Sf3b3Q921M3 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Sf3b3Q921M3 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Sf3b3Q921M3 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Sf3b3Q921M3 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Sf3b3Q921M3 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC20.39■□□□□ 0.85
Sf3b3Q921M3 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Sf3b3Q921M3 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Sf3b3Q921M3 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Sf3b3Q921M3 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Sf3b3Q921M3 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Sf3b3Q921M3 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.85
Sf3b3Q921M3 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
Sf3b3Q921M3 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Sf3b3Q921M3 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
Sf3b3Q921M3 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Sf3b3Q921M3 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Sf3b3Q921M3 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Sf3b3Q921M3 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Sf3b3Q921M3 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Sf3b3Q921M3 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
Sf3b3Q921M3 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
Sf3b3Q921M3 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Sf3b3Q921M3 Rprl3-201ENSMUST00000157400 290 ntBASIC20.38■□□□□ 0.85
Sf3b3Q921M3 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
Sf3b3Q921M3 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Sf3b3Q921M3 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC20.38■□□□□ 0.85
Retrieved 100 of 76,532 protein–RNA pairs in 26.5 ms