Protein–RNA interactions for Protein: Q91Y12

Pcdha8, Protocadherin alpha 8, mousemouse

Predictions only

Length 946 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha8Q91Y12 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Pcdha8Q91Y12 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Pcdha8Q91Y12 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC16.56■□□□□ 0.24
Pcdha8Q91Y12 Gm7712-202ENSMUST00000222331 1510 ntBASIC16.56■□□□□ 0.24
Pcdha8Q91Y12 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Pcdha8Q91Y12 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Pcdha8Q91Y12 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Pcdha8Q91Y12 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC16.56■□□□□ 0.24
Pcdha8Q91Y12 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Pcdha8Q91Y12 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC16.56■□□□□ 0.24
Pcdha8Q91Y12 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC16.56■□□□□ 0.24
Pcdha8Q91Y12 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC16.56■□□□□ 0.24
Pcdha8Q91Y12 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
Pcdha8Q91Y12 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Pcdha8Q91Y12 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Pcdha8Q91Y12 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
Pcdha8Q91Y12 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Pcdha8Q91Y12 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
Pcdha8Q91Y12 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Pcdha8Q91Y12 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC16.56■□□□□ 0.24
Pcdha8Q91Y12 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
Pcdha8Q91Y12 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Pcdha8Q91Y12 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
Pcdha8Q91Y12 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Pcdha8Q91Y12 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Pcdha8Q91Y12 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
Pcdha8Q91Y12 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Pcdha8Q91Y12 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Pcdha8Q91Y12 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Pcdha8Q91Y12 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Pcdha8Q91Y12 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
Pcdha8Q91Y12 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Pcdha8Q91Y12 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC16.55■□□□□ 0.24
Pcdha8Q91Y12 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Pcdha8Q91Y12 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Pcdha8Q91Y12 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Pcdha8Q91Y12 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Pcdha8Q91Y12 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Pcdha8Q91Y12 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Pcdha8Q91Y12 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Pcdha8Q91Y12 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Pcdha8Q91Y12 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Pcdha8Q91Y12 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Pcdha8Q91Y12 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Pcdha8Q91Y12 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Pcdha8Q91Y12 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Pcdha8Q91Y12 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Pcdha8Q91Y12 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Pcdha8Q91Y12 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Pcdha8Q91Y12 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
Pcdha8Q91Y12 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC16.54■□□□□ 0.24
Pcdha8Q91Y12 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Pcdha8Q91Y12 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
Pcdha8Q91Y12 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
Pcdha8Q91Y12 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Pcdha8Q91Y12 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC16.54■□□□□ 0.24
Pcdha8Q91Y12 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Pcdha8Q91Y12 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Pcdha8Q91Y12 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
Pcdha8Q91Y12 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
Pcdha8Q91Y12 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdha8Q91Y12 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdha8Q91Y12 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
Pcdha8Q91Y12 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
Pcdha8Q91Y12 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC16.53■□□□□ 0.24
Pcdha8Q91Y12 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdha8Q91Y12 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdha8Q91Y12 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdha8Q91Y12 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdha8Q91Y12 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdha8Q91Y12 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
Pcdha8Q91Y12 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdha8Q91Y12 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdha8Q91Y12 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdha8Q91Y12 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
Pcdha8Q91Y12 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdha8Q91Y12 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
Pcdha8Q91Y12 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdha8Q91Y12 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdha8Q91Y12 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdha8Q91Y12 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Pcdha8Q91Y12 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Pcdha8Q91Y12 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Pcdha8Q91Y12 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
Pcdha8Q91Y12 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
Pcdha8Q91Y12 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
Pcdha8Q91Y12 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC16.52■□□□□ 0.24
Pcdha8Q91Y12 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Pcdha8Q91Y12 Gm37025-201ENSMUST00000195159 829 ntBASIC16.52■□□□□ 0.24
Pcdha8Q91Y12 Gm16042-201ENSMUST00000204813 1247 ntBASIC16.52■□□□□ 0.24
Pcdha8Q91Y12 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Pcdha8Q91Y12 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.23
Pcdha8Q91Y12 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
Pcdha8Q91Y12 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Pcdha8Q91Y12 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
Pcdha8Q91Y12 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Pcdha8Q91Y12 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Pcdha8Q91Y12 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Pcdha8Q91Y12 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
Pcdha8Q91Y12 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 34.8 ms