Protein–RNA interactions for Protein: Q91XZ8

Pcdhb22, Protocadherin beta 22, mousemouse

Predictions only

Length 794 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb22Q91XZ8 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Pcdhb22Q91XZ8 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
Pcdhb22Q91XZ8 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC19.84■□□□□ 0.77
Pcdhb22Q91XZ8 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Pcdhb22Q91XZ8 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Pcdhb22Q91XZ8 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC19.84■□□□□ 0.77
Pcdhb22Q91XZ8 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
Pcdhb22Q91XZ8 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
Pcdhb22Q91XZ8 Gm9987-201ENSMUST00000069768 567 ntBASIC19.84■□□□□ 0.77
Pcdhb22Q91XZ8 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
Pcdhb22Q91XZ8 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Pcdhb22Q91XZ8 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
Pcdhb22Q91XZ8 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Pcdhb22Q91XZ8 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Pcdhb22Q91XZ8 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
Pcdhb22Q91XZ8 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.77
Pcdhb22Q91XZ8 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Pcdhb22Q91XZ8 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.77
Pcdhb22Q91XZ8 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Pcdhb22Q91XZ8 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
Pcdhb22Q91XZ8 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
Pcdhb22Q91XZ8 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.77
Pcdhb22Q91XZ8 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Pcdhb22Q91XZ8 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Pcdhb22Q91XZ8 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC19.83■□□□□ 0.77
Pcdhb22Q91XZ8 AC107711.5-202ENSMUST00000226429 702 ntBASIC19.83■□□□□ 0.77
Pcdhb22Q91XZ8 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC19.83■□□□□ 0.76
Pcdhb22Q91XZ8 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.76
Pcdhb22Q91XZ8 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Pcdhb22Q91XZ8 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
Pcdhb22Q91XZ8 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
Pcdhb22Q91XZ8 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Pcdhb22Q91XZ8 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Pcdhb22Q91XZ8 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Pcdhb22Q91XZ8 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
Pcdhb22Q91XZ8 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Pcdhb22Q91XZ8 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC19.82■□□□□ 0.76
Pcdhb22Q91XZ8 Mir7071-201ENSMUST00000184847 69 ntBASIC19.82■□□□□ 0.76
Pcdhb22Q91XZ8 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC19.82■□□□□ 0.76
Pcdhb22Q91XZ8 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC19.82■□□□□ 0.76
Pcdhb22Q91XZ8 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Pcdhb22Q91XZ8 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Pcdhb22Q91XZ8 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
Pcdhb22Q91XZ8 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Pcdhb22Q91XZ8 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Pcdhb22Q91XZ8 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Pcdhb22Q91XZ8 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
Pcdhb22Q91XZ8 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC19.81■□□□□ 0.76
Pcdhb22Q91XZ8 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Pcdhb22Q91XZ8 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Pcdhb22Q91XZ8 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Pcdhb22Q91XZ8 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Pcdhb22Q91XZ8 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC19.81■□□□□ 0.76
Pcdhb22Q91XZ8 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Pcdhb22Q91XZ8 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Pcdhb22Q91XZ8 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Pcdhb22Q91XZ8 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
Pcdhb22Q91XZ8 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
Pcdhb22Q91XZ8 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Pcdhb22Q91XZ8 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Pcdhb22Q91XZ8 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Pcdhb22Q91XZ8 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Pcdhb22Q91XZ8 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Pcdhb22Q91XZ8 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
Pcdhb22Q91XZ8 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Pcdhb22Q91XZ8 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC19.8■□□□□ 0.76
Pcdhb22Q91XZ8 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Pcdhb22Q91XZ8 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC19.8■□□□□ 0.76
Pcdhb22Q91XZ8 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
Pcdhb22Q91XZ8 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Pcdhb22Q91XZ8 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
Pcdhb22Q91XZ8 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Pcdhb22Q91XZ8 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
Pcdhb22Q91XZ8 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Pcdhb22Q91XZ8 Gm19439-201ENSMUST00000198195 2273 ntBASIC19.8■□□□□ 0.76
Pcdhb22Q91XZ8 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
Pcdhb22Q91XZ8 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
Pcdhb22Q91XZ8 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
Pcdhb22Q91XZ8 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC19.8■□□□□ 0.76
Pcdhb22Q91XZ8 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
Pcdhb22Q91XZ8 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Pcdhb22Q91XZ8 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Pcdhb22Q91XZ8 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
Pcdhb22Q91XZ8 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Pcdhb22Q91XZ8 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Pcdhb22Q91XZ8 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
Pcdhb22Q91XZ8 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
Pcdhb22Q91XZ8 Actl10-202ENSMUST00000226583 1501 ntBASIC19.8■□□□□ 0.76
Pcdhb22Q91XZ8 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Pcdhb22Q91XZ8 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Pcdhb22Q91XZ8 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC19.8■□□□□ 0.76
Pcdhb22Q91XZ8 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Pcdhb22Q91XZ8 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Pcdhb22Q91XZ8 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Pcdhb22Q91XZ8 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Pcdhb22Q91XZ8 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Pcdhb22Q91XZ8 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
Pcdhb22Q91XZ8 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Pcdhb22Q91XZ8 Mir1668-201ENSMUST00000184114 107 ntBASIC19.79■□□□□ 0.76
Pcdhb22Q91XZ8 Gm7213-201ENSMUST00000215977 950 ntBASIC19.79■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 31.5 ms