Protein–RNA interactions for Protein: Q91XZ4

Pcdhb6, Protocadherin beta-6, mousemouse

Predictions only

Length 772 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb6Q91XZ4 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Pcdhb6Q91XZ4 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Pcdhb6Q91XZ4 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Pcdhb6Q91XZ4 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC17.47■□□□□ 0.39
Pcdhb6Q91XZ4 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Pcdhb6Q91XZ4 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Pcdhb6Q91XZ4 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Pcdhb6Q91XZ4 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
Pcdhb6Q91XZ4 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC17.46■□□□□ 0.39
Pcdhb6Q91XZ4 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
Pcdhb6Q91XZ4 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Pcdhb6Q91XZ4 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Pcdhb6Q91XZ4 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Pcdhb6Q91XZ4 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC17.46■□□□□ 0.39
Pcdhb6Q91XZ4 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC17.46■□□□□ 0.39
Pcdhb6Q91XZ4 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Pcdhb6Q91XZ4 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
Pcdhb6Q91XZ4 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Pcdhb6Q91XZ4 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
Pcdhb6Q91XZ4 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
Pcdhb6Q91XZ4 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
Pcdhb6Q91XZ4 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Pcdhb6Q91XZ4 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Pcdhb6Q91XZ4 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Pcdhb6Q91XZ4 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Pcdhb6Q91XZ4 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.38
Pcdhb6Q91XZ4 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
Pcdhb6Q91XZ4 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Pcdhb6Q91XZ4 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Pcdhb6Q91XZ4 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Pcdhb6Q91XZ4 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC17.45■□□□□ 0.38
Pcdhb6Q91XZ4 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Pcdhb6Q91XZ4 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Pcdhb6Q91XZ4 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC17.45■□□□□ 0.38
Pcdhb6Q91XZ4 Gm13216-201ENSMUST00000117145 591 ntBASIC17.45■□□□□ 0.38
Pcdhb6Q91XZ4 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
Pcdhb6Q91XZ4 Gm27463-201ENSMUST00000183569 57 ntBASIC17.45■□□□□ 0.38
Pcdhb6Q91XZ4 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC17.45■□□□□ 0.38
Pcdhb6Q91XZ4 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Pcdhb6Q91XZ4 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
Pcdhb6Q91XZ4 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC17.45■□□□□ 0.38
Pcdhb6Q91XZ4 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Pcdhb6Q91XZ4 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Pcdhb6Q91XZ4 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
Pcdhb6Q91XZ4 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Pcdhb6Q91XZ4 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Pcdhb6Q91XZ4 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Pcdhb6Q91XZ4 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
Pcdhb6Q91XZ4 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Pcdhb6Q91XZ4 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Pcdhb6Q91XZ4 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Pcdhb6Q91XZ4 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Pcdhb6Q91XZ4 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Pcdhb6Q91XZ4 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC17.44■□□□□ 0.38
Pcdhb6Q91XZ4 Cxcl14-202ENSMUST00000224801 1467 ntBASIC17.44■□□□□ 0.38
Pcdhb6Q91XZ4 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Pcdhb6Q91XZ4 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC17.44■□□□□ 0.38
Pcdhb6Q91XZ4 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Pcdhb6Q91XZ4 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC17.44■□□□□ 0.38
Pcdhb6Q91XZ4 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Pcdhb6Q91XZ4 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
Pcdhb6Q91XZ4 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC17.44■□□□□ 0.38
Pcdhb6Q91XZ4 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Pcdhb6Q91XZ4 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Pcdhb6Q91XZ4 AL672049.1-201ENSMUST00000197943 91 ntBASIC17.44■□□□□ 0.38
Pcdhb6Q91XZ4 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Pcdhb6Q91XZ4 Gm5417-201ENSMUST00000079706 384 ntBASIC17.44■□□□□ 0.38
Pcdhb6Q91XZ4 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Pcdhb6Q91XZ4 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Pcdhb6Q91XZ4 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Pcdhb6Q91XZ4 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
Pcdhb6Q91XZ4 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Pcdhb6Q91XZ4 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
Pcdhb6Q91XZ4 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
Pcdhb6Q91XZ4 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
Pcdhb6Q91XZ4 Gm37055-201ENSMUST00000191866 133 ntBASIC17.43■□□□□ 0.38
Pcdhb6Q91XZ4 Gm5297-201ENSMUST00000198555 1171 ntBASIC17.43■□□□□ 0.38
Pcdhb6Q91XZ4 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
Pcdhb6Q91XZ4 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
Pcdhb6Q91XZ4 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Pcdhb6Q91XZ4 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC17.43■□□□□ 0.38
Pcdhb6Q91XZ4 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
Pcdhb6Q91XZ4 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC17.43■□□□□ 0.38
Pcdhb6Q91XZ4 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
Pcdhb6Q91XZ4 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Pcdhb6Q91XZ4 Gm8839-201ENSMUST00000121279 1645 ntBASIC17.43■□□□□ 0.38
Pcdhb6Q91XZ4 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Pcdhb6Q91XZ4 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Pcdhb6Q91XZ4 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC17.42■□□□□ 0.38
Pcdhb6Q91XZ4 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Pcdhb6Q91XZ4 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Pcdhb6Q91XZ4 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Pcdhb6Q91XZ4 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Pcdhb6Q91XZ4 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Pcdhb6Q91XZ4 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Pcdhb6Q91XZ4 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Pcdhb6Q91XZ4 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Pcdhb6Q91XZ4 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Pcdhb6Q91XZ4 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Pcdhb6Q91XZ4 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 55 ms