Protein–RNA interactions for Protein: Q91XX9

Pcdhga9, Protocadherin gamma A9, mousemouse

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga9Q91XX9 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.29
Pcdhga9Q91XX9 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Pcdhga9Q91XX9 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC16.83■□□□□ 0.29
Pcdhga9Q91XX9 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Pcdhga9Q91XX9 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.29
Pcdhga9Q91XX9 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Pcdhga9Q91XX9 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Pcdhga9Q91XX9 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC16.83■□□□□ 0.28
Pcdhga9Q91XX9 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC16.83■□□□□ 0.28
Pcdhga9Q91XX9 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Pcdhga9Q91XX9 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Pcdhga9Q91XX9 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Pcdhga9Q91XX9 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Pcdhga9Q91XX9 Il3ra-202ENSMUST00000223589 738 ntBASIC16.83■□□□□ 0.28
Pcdhga9Q91XX9 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Pcdhga9Q91XX9 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Pcdhga9Q91XX9 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Pcdhga9Q91XX9 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
Pcdhga9Q91XX9 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Pcdhga9Q91XX9 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Pcdhga9Q91XX9 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Pcdhga9Q91XX9 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
Pcdhga9Q91XX9 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
Pcdhga9Q91XX9 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pcdhga9Q91XX9 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pcdhga9Q91XX9 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pcdhga9Q91XX9 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pcdhga9Q91XX9 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Pcdhga9Q91XX9 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pcdhga9Q91XX9 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pcdhga9Q91XX9 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Pcdhga9Q91XX9 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pcdhga9Q91XX9 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pcdhga9Q91XX9 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pcdhga9Q91XX9 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC16.82■□□□□ 0.28
Pcdhga9Q91XX9 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Pcdhga9Q91XX9 AC120002.2-201ENSMUST00000220205 773 ntBASIC16.82■□□□□ 0.28
Pcdhga9Q91XX9 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC16.82■□□□□ 0.28
Pcdhga9Q91XX9 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pcdhga9Q91XX9 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pcdhga9Q91XX9 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
Pcdhga9Q91XX9 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pcdhga9Q91XX9 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pcdhga9Q91XX9 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pcdhga9Q91XX9 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC16.82■□□□□ 0.28
Pcdhga9Q91XX9 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pcdhga9Q91XX9 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC16.82■□□□□ 0.28
Pcdhga9Q91XX9 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC16.82■□□□□ 0.28
Pcdhga9Q91XX9 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pcdhga9Q91XX9 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pcdhga9Q91XX9 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pcdhga9Q91XX9 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pcdhga9Q91XX9 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Pcdhga9Q91XX9 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC16.81■□□□□ 0.28
Pcdhga9Q91XX9 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Pcdhga9Q91XX9 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Pcdhga9Q91XX9 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Pcdhga9Q91XX9 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Pcdhga9Q91XX9 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Pcdhga9Q91XX9 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Pcdhga9Q91XX9 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Pcdhga9Q91XX9 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Pcdhga9Q91XX9 Gm6598-201ENSMUST00000202719 2615 ntBASIC16.81■□□□□ 0.28
Pcdhga9Q91XX9 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Pcdhga9Q91XX9 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC16.81■□□□□ 0.28
Pcdhga9Q91XX9 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Pcdhga9Q91XX9 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Pcdhga9Q91XX9 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Pcdhga9Q91XX9 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Pcdhga9Q91XX9 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Pcdhga9Q91XX9 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
Pcdhga9Q91XX9 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdhga9Q91XX9 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdhga9Q91XX9 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdhga9Q91XX9 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdhga9Q91XX9 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdhga9Q91XX9 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdhga9Q91XX9 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdhga9Q91XX9 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdhga9Q91XX9 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdhga9Q91XX9 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdhga9Q91XX9 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC16.8■□□□□ 0.28
Pcdhga9Q91XX9 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Pcdhga9Q91XX9 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Pcdhga9Q91XX9 Gm7791-201ENSMUST00000219066 539 ntBASIC16.8■□□□□ 0.28
Pcdhga9Q91XX9 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdhga9Q91XX9 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
Pcdhga9Q91XX9 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdhga9Q91XX9 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC16.8■□□□□ 0.28
Pcdhga9Q91XX9 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdhga9Q91XX9 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC16.8■□□□□ 0.28
Pcdhga9Q91XX9 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC16.8■□□□□ 0.28
Pcdhga9Q91XX9 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
Pcdhga9Q91XX9 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdhga9Q91XX9 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Pcdhga9Q91XX9 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Pcdhga9Q91XX9 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Pcdhga9Q91XX9 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC16.79■□□□□ 0.28
Pcdhga9Q91XX9 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Pcdhga9Q91XX9 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 30.8 ms