Protein–RNA interactions for Protein: Q91XD6

Vps36, Vacuolar protein-sorting-associated protein 36, mousemouse

Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps36Q91XD6 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Vps36Q91XD6 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Vps36Q91XD6 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Vps36Q91XD6 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
Vps36Q91XD6 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
Vps36Q91XD6 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Vps36Q91XD6 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Vps36Q91XD6 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Vps36Q91XD6 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Vps36Q91XD6 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC18.35■□□□□ 0.53
Vps36Q91XD6 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC18.35■□□□□ 0.53
Vps36Q91XD6 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Vps36Q91XD6 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Vps36Q91XD6 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
Vps36Q91XD6 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Vps36Q91XD6 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Vps36Q91XD6 Mir1199-201ENSMUST00000117015 119 ntBASIC18.35■□□□□ 0.53
Vps36Q91XD6 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Vps36Q91XD6 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Vps36Q91XD6 AC175538.1-201ENSMUST00000225343 1269 ntBASIC18.35■□□□□ 0.53
Vps36Q91XD6 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC18.35■□□□□ 0.53
Vps36Q91XD6 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Vps36Q91XD6 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Vps36Q91XD6 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Vps36Q91XD6 Gm11620-201ENSMUST00000118770 1845 ntBASIC18.35■□□□□ 0.53
Vps36Q91XD6 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Vps36Q91XD6 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Vps36Q91XD6 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Vps36Q91XD6 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Vps36Q91XD6 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC18.34■□□□□ 0.53
Vps36Q91XD6 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Vps36Q91XD6 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Vps36Q91XD6 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Vps36Q91XD6 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
Vps36Q91XD6 Gm9731-201ENSMUST00000209480 747 ntBASIC18.34■□□□□ 0.53
Vps36Q91XD6 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Vps36Q91XD6 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC18.34■□□□□ 0.53
Vps36Q91XD6 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Vps36Q91XD6 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Vps36Q91XD6 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Vps36Q91XD6 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Vps36Q91XD6 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC18.34■□□□□ 0.53
Vps36Q91XD6 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Vps36Q91XD6 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Vps36Q91XD6 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
Vps36Q91XD6 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC18.33■□□□□ 0.53
Vps36Q91XD6 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Vps36Q91XD6 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC18.33■□□□□ 0.53
Vps36Q91XD6 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Vps36Q91XD6 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Vps36Q91XD6 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.53
Vps36Q91XD6 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC18.33■□□□□ 0.53
Vps36Q91XD6 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
Vps36Q91XD6 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Vps36Q91XD6 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.52
Vps36Q91XD6 Gm12085-201ENSMUST00000119263 940 ntBASIC18.33■□□□□ 0.52
Vps36Q91XD6 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
Vps36Q91XD6 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC18.33■□□□□ 0.52
Vps36Q91XD6 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Vps36Q91XD6 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
Vps36Q91XD6 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Vps36Q91XD6 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
Vps36Q91XD6 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Vps36Q91XD6 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Vps36Q91XD6 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Vps36Q91XD6 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Vps36Q91XD6 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Vps36Q91XD6 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Vps36Q91XD6 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Vps36Q91XD6 Gm38027-201ENSMUST00000192315 235 ntBASIC18.32■□□□□ 0.52
Vps36Q91XD6 Timm23-208ENSMUST00000226683 750 ntBASIC18.32■□□□□ 0.52
Vps36Q91XD6 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
Vps36Q91XD6 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Vps36Q91XD6 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Vps36Q91XD6 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
Vps36Q91XD6 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Vps36Q91XD6 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Vps36Q91XD6 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Vps36Q91XD6 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Vps36Q91XD6 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Vps36Q91XD6 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Vps36Q91XD6 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
Vps36Q91XD6 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Vps36Q91XD6 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Vps36Q91XD6 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Vps36Q91XD6 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
Vps36Q91XD6 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
Vps36Q91XD6 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Vps36Q91XD6 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC18.31■□□□□ 0.52
Vps36Q91XD6 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Vps36Q91XD6 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Vps36Q91XD6 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC18.31■□□□□ 0.52
Vps36Q91XD6 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC18.31■□□□□ 0.52
Vps36Q91XD6 AC153881.1-201ENSMUST00000214448 284 ntBASIC18.31■□□□□ 0.52
Vps36Q91XD6 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Vps36Q91XD6 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Vps36Q91XD6 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Vps36Q91XD6 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Vps36Q91XD6 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Vps36Q91XD6 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 21.5 ms