Protein–RNA interactions for Protein: Q91XD2

Lims2, LIM and senescent cell antigen-like-containing domain protein 2, mousemouse

Predictions only

Length 341 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lims2Q91XD2 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Lims2Q91XD2 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Lims2Q91XD2 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
Lims2Q91XD2 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Lims2Q91XD2 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
Lims2Q91XD2 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC17.39■□□□□ 0.37
Lims2Q91XD2 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC17.39■□□□□ 0.37
Lims2Q91XD2 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Lims2Q91XD2 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Lims2Q91XD2 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Lims2Q91XD2 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Lims2Q91XD2 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC17.39■□□□□ 0.37
Lims2Q91XD2 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Lims2Q91XD2 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Lims2Q91XD2 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Lims2Q91XD2 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Lims2Q91XD2 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Lims2Q91XD2 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Lims2Q91XD2 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Lims2Q91XD2 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Lims2Q91XD2 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC17.38■□□□□ 0.37
Lims2Q91XD2 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Lims2Q91XD2 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
Lims2Q91XD2 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Lims2Q91XD2 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
Lims2Q91XD2 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Lims2Q91XD2 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
Lims2Q91XD2 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Lims2Q91XD2 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Lims2Q91XD2 Gm45203-201ENSMUST00000206384 1831 ntBASIC17.37■□□□□ 0.37
Lims2Q91XD2 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Lims2Q91XD2 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC17.37■□□□□ 0.37
Lims2Q91XD2 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Lims2Q91XD2 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Lims2Q91XD2 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC17.37■□□□□ 0.37
Lims2Q91XD2 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Lims2Q91XD2 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC17.37■□□□□ 0.37
Lims2Q91XD2 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
Lims2Q91XD2 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Lims2Q91XD2 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Lims2Q91XD2 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Lims2Q91XD2 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Lims2Q91XD2 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Lims2Q91XD2 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Lims2Q91XD2 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Lims2Q91XD2 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Lims2Q91XD2 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC17.37■□□□□ 0.37
Lims2Q91XD2 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Lims2Q91XD2 Gm11841-201ENSMUST00000117060 1963 ntBASIC17.37■□□□□ 0.37
Lims2Q91XD2 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Lims2Q91XD2 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC17.36■□□□□ 0.37
Lims2Q91XD2 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
Lims2Q91XD2 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Lims2Q91XD2 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Lims2Q91XD2 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Lims2Q91XD2 Gm29518-201ENSMUST00000190858 372 ntBASIC17.36■□□□□ 0.37
Lims2Q91XD2 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Lims2Q91XD2 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Lims2Q91XD2 Gm16401-202ENSMUST00000197463 2074 ntBASIC17.36■□□□□ 0.37
Lims2Q91XD2 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Lims2Q91XD2 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Lims2Q91XD2 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC17.36■□□□□ 0.37
Lims2Q91XD2 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Lims2Q91XD2 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Lims2Q91XD2 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Lims2Q91XD2 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Lims2Q91XD2 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
Lims2Q91XD2 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
Lims2Q91XD2 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Lims2Q91XD2 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
Lims2Q91XD2 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Lims2Q91XD2 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Lims2Q91XD2 Gm29707-201ENSMUST00000196325 491 ntBASIC17.35■□□□□ 0.37
Lims2Q91XD2 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC17.35■□□□□ 0.37
Lims2Q91XD2 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Lims2Q91XD2 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Lims2Q91XD2 Zfp264-201ENSMUST00000208656 1563 ntBASIC17.35■□□□□ 0.37
Lims2Q91XD2 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Lims2Q91XD2 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Lims2Q91XD2 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC17.35■□□□□ 0.37
Lims2Q91XD2 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Lims2Q91XD2 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Lims2Q91XD2 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Lims2Q91XD2 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
Lims2Q91XD2 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
Lims2Q91XD2 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC17.34■□□□□ 0.37
Lims2Q91XD2 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
Lims2Q91XD2 Gm43294-201ENSMUST00000202850 2490 ntBASIC17.34■□□□□ 0.37
Lims2Q91XD2 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC17.34■□□□□ 0.37
Lims2Q91XD2 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC17.34■□□□□ 0.37
Lims2Q91XD2 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Lims2Q91XD2 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Lims2Q91XD2 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC17.34■□□□□ 0.37
Lims2Q91XD2 AC154471.1-201ENSMUST00000224418 436 ntBASIC17.34■□□□□ 0.37
Lims2Q91XD2 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Lims2Q91XD2 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
Lims2Q91XD2 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Lims2Q91XD2 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Lims2Q91XD2 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Lims2Q91XD2 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 19 ms