Protein–RNA interactions for Protein: Q91XB0

Trex1, Three-prime repair exonuclease 1, mousemouse

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trex1Q91XB0 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
Trex1Q91XB0 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Trex1Q91XB0 Gm34391-201ENSMUST00000203706 907 ntBASIC19.48■□□□□ 0.71
Trex1Q91XB0 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC19.48■□□□□ 0.71
Trex1Q91XB0 AC133598.3-202ENSMUST00000224219 531 ntBASIC19.48■□□□□ 0.71
Trex1Q91XB0 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Trex1Q91XB0 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Trex1Q91XB0 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Trex1Q91XB0 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Trex1Q91XB0 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Trex1Q91XB0 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
Trex1Q91XB0 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Trex1Q91XB0 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC19.47■□□□□ 0.71
Trex1Q91XB0 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Trex1Q91XB0 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
Trex1Q91XB0 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Trex1Q91XB0 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC19.47■□□□□ 0.71
Trex1Q91XB0 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Trex1Q91XB0 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Trex1Q91XB0 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Trex1Q91XB0 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
Trex1Q91XB0 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC19.47■□□□□ 0.71
Trex1Q91XB0 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC19.47■□□□□ 0.71
Trex1Q91XB0 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Trex1Q91XB0 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Trex1Q91XB0 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Trex1Q91XB0 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Trex1Q91XB0 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
Trex1Q91XB0 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
Trex1Q91XB0 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
Trex1Q91XB0 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC19.47■□□□□ 0.71
Trex1Q91XB0 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
Trex1Q91XB0 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Trex1Q91XB0 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Trex1Q91XB0 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Trex1Q91XB0 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Trex1Q91XB0 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Trex1Q91XB0 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Trex1Q91XB0 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
Trex1Q91XB0 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC19.46■□□□□ 0.71
Trex1Q91XB0 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC19.46■□□□□ 0.71
Trex1Q91XB0 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Trex1Q91XB0 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Trex1Q91XB0 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
Trex1Q91XB0 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
Trex1Q91XB0 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Trex1Q91XB0 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Trex1Q91XB0 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Trex1Q91XB0 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
Trex1Q91XB0 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Trex1Q91XB0 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Trex1Q91XB0 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC19.45■□□□□ 0.7
Trex1Q91XB0 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC19.45■□□□□ 0.7
Trex1Q91XB0 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Trex1Q91XB0 Gm44450-201ENSMUST00000199528 114 ntBASIC19.45■□□□□ 0.7
Trex1Q91XB0 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC19.45■□□□□ 0.7
Trex1Q91XB0 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC19.45■□□□□ 0.7
Trex1Q91XB0 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Trex1Q91XB0 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Trex1Q91XB0 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Trex1Q91XB0 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC19.45■□□□□ 0.7
Trex1Q91XB0 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Trex1Q91XB0 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC19.44■□□□□ 0.7
Trex1Q91XB0 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
Trex1Q91XB0 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC19.44■□□□□ 0.7
Trex1Q91XB0 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
Trex1Q91XB0 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC19.44■□□□□ 0.7
Trex1Q91XB0 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC19.44■□□□□ 0.7
Trex1Q91XB0 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC19.44■□□□□ 0.7
Trex1Q91XB0 AC124569.2-201ENSMUST00000225998 818 ntBASIC19.44■□□□□ 0.7
Trex1Q91XB0 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Trex1Q91XB0 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Trex1Q91XB0 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Trex1Q91XB0 Gm42939-201ENSMUST00000197514 2205 ntBASIC19.44■□□□□ 0.7
Trex1Q91XB0 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Trex1Q91XB0 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
Trex1Q91XB0 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Trex1Q91XB0 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Trex1Q91XB0 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
Trex1Q91XB0 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Trex1Q91XB0 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
Trex1Q91XB0 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Trex1Q91XB0 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Trex1Q91XB0 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Trex1Q91XB0 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC19.43■□□□□ 0.7
Trex1Q91XB0 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC19.43■□□□□ 0.7
Trex1Q91XB0 AC125350.1-201ENSMUST00000225115 903 ntBASIC19.43■□□□□ 0.7
Trex1Q91XB0 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Trex1Q91XB0 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC19.43■□□□□ 0.7
Trex1Q91XB0 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
Trex1Q91XB0 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Trex1Q91XB0 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
Trex1Q91XB0 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC19.43■□□□□ 0.7
Trex1Q91XB0 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Trex1Q91XB0 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Trex1Q91XB0 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Trex1Q91XB0 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Trex1Q91XB0 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
Trex1Q91XB0 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Trex1Q91XB0 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC19.42■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 45 ms