Protein–RNA interactions for Protein: Q8VI88

Odf4, Outer dense fiber protein 4, mousemouse

Predictions only

Length 290 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Odf4Q8VI88 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Odf4Q8VI88 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Odf4Q8VI88 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Odf4Q8VI88 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC15.22■□□□□ 0.03
Odf4Q8VI88 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
Odf4Q8VI88 Gm10138-203ENSMUST00000206952 366 ntBASIC15.22■□□□□ 0.03
Odf4Q8VI88 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
Odf4Q8VI88 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC15.22■□□□□ 0.03
Odf4Q8VI88 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Odf4Q8VI88 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Odf4Q8VI88 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Odf4Q8VI88 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Odf4Q8VI88 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Odf4Q8VI88 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Odf4Q8VI88 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Odf4Q8VI88 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Odf4Q8VI88 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Odf4Q8VI88 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Odf4Q8VI88 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Odf4Q8VI88 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Odf4Q8VI88 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Odf4Q8VI88 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Odf4Q8VI88 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC15.21■□□□□ 0.03
Odf4Q8VI88 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Odf4Q8VI88 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
Odf4Q8VI88 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC15.21■□□□□ 0.03
Odf4Q8VI88 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC15.21■□□□□ 0.03
Odf4Q8VI88 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC15.21■□□□□ 0.03
Odf4Q8VI88 Gm7977-201ENSMUST00000193787 748 ntBASIC15.21■□□□□ 0.03
Odf4Q8VI88 Gm9484-201ENSMUST00000195892 1159 ntBASIC15.21■□□□□ 0.03
Odf4Q8VI88 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Odf4Q8VI88 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC15.21■□□□□ 0.03
Odf4Q8VI88 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Odf4Q8VI88 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
Odf4Q8VI88 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
Odf4Q8VI88 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.02
Odf4Q8VI88 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Odf4Q8VI88 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Odf4Q8VI88 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Odf4Q8VI88 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Odf4Q8VI88 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC15.2■□□□□ 0.02
Odf4Q8VI88 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Odf4Q8VI88 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Odf4Q8VI88 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC15.2■□□□□ 0.02
Odf4Q8VI88 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC15.2■□□□□ 0.02
Odf4Q8VI88 Gm20472-201ENSMUST00000174403 1240 ntBASIC15.2■□□□□ 0.02
Odf4Q8VI88 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC15.2■□□□□ 0.02
Odf4Q8VI88 Gm5417-201ENSMUST00000079706 384 ntBASIC15.2■□□□□ 0.02
Odf4Q8VI88 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Odf4Q8VI88 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Odf4Q8VI88 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Odf4Q8VI88 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Odf4Q8VI88 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Odf4Q8VI88 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Odf4Q8VI88 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Odf4Q8VI88 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC15.2■□□□□ 0.02
Odf4Q8VI88 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Odf4Q8VI88 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC15.2■□□□□ 0.02
Odf4Q8VI88 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC15.2■□□□□ 0.02
Odf4Q8VI88 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Odf4Q8VI88 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC15.19■□□□□ 0.02
Odf4Q8VI88 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC15.19■□□□□ 0.02
Odf4Q8VI88 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
Odf4Q8VI88 Gm37166-201ENSMUST00000195473 2474 ntBASIC15.19■□□□□ 0.02
Odf4Q8VI88 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Odf4Q8VI88 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Odf4Q8VI88 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
Odf4Q8VI88 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
Odf4Q8VI88 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
Odf4Q8VI88 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Odf4Q8VI88 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC15.19■□□□□ 0.02
Odf4Q8VI88 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC15.19■□□□□ 0.02
Odf4Q8VI88 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
Odf4Q8VI88 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC15.19■□□□□ 0.02
Odf4Q8VI88 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC15.19■□□□□ 0.02
Odf4Q8VI88 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
Odf4Q8VI88 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
Odf4Q8VI88 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
Odf4Q8VI88 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC15.19■□□□□ 0.02
Odf4Q8VI88 Gm43183-201ENSMUST00000200632 547 ntBASIC15.19■□□□□ 0.02
Odf4Q8VI88 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Odf4Q8VI88 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Odf4Q8VI88 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Odf4Q8VI88 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Odf4Q8VI88 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Odf4Q8VI88 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Odf4Q8VI88 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Odf4Q8VI88 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC15.19■□□□□ 0.02
Odf4Q8VI88 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC15.18■□□□□ 0.02
Odf4Q8VI88 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC15.18■□□□□ 0.02
Odf4Q8VI88 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
Odf4Q8VI88 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC15.18■□□□□ 0.02
Odf4Q8VI88 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Odf4Q8VI88 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Odf4Q8VI88 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
Odf4Q8VI88 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
Odf4Q8VI88 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
Odf4Q8VI88 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
Odf4Q8VI88 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC15.18■□□□□ 0.02
Odf4Q8VI88 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 26 ms