Protein–RNA interactions for Protein: Q8VHY0

Cspg4, Chondroitin sulfate proteoglycan 4, mousemouse

Predictions only

Length 2,327 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cspg4Q8VHY0 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Cspg4Q8VHY0 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Cspg4Q8VHY0 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
Cspg4Q8VHY0 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC14.61□□□□□ -0.07
Cspg4Q8VHY0 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Cspg4Q8VHY0 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Cspg4Q8VHY0 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Cspg4Q8VHY0 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Cspg4Q8VHY0 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Cspg4Q8VHY0 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Cspg4Q8VHY0 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC14.6□□□□□ -0.07
Cspg4Q8VHY0 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Cspg4Q8VHY0 Gm27321-201ENSMUST00000185021 205 ntBASIC14.6□□□□□ -0.07
Cspg4Q8VHY0 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC14.6□□□□□ -0.07
Cspg4Q8VHY0 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Cspg4Q8VHY0 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
Cspg4Q8VHY0 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Cspg4Q8VHY0 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Cspg4Q8VHY0 Gm4995-201ENSMUST00000117247 432 ntBASIC14.6□□□□□ -0.07
Cspg4Q8VHY0 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Cspg4Q8VHY0 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Cspg4Q8VHY0 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Cspg4Q8VHY0 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Cspg4Q8VHY0 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Cspg4Q8VHY0 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Cspg4Q8VHY0 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Cspg4Q8VHY0 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC14.59□□□□□ -0.07
Cspg4Q8VHY0 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Cspg4Q8VHY0 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Cspg4Q8VHY0 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
Cspg4Q8VHY0 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Cspg4Q8VHY0 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC14.59□□□□□ -0.07
Cspg4Q8VHY0 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Cspg4Q8VHY0 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Cspg4Q8VHY0 Tspan31-201ENSMUST00000060991 1556 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Cspg4Q8VHY0 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC14.59□□□□□ -0.07
Cspg4Q8VHY0 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Cspg4Q8VHY0 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Cspg4Q8VHY0 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC14.59□□□□□ -0.07
Cspg4Q8VHY0 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Cspg4Q8VHY0 Mafg-203ENSMUST00000106181 840 ntAPPRIS P1 TSL 3 BASIC14.59□□□□□ -0.07
Cspg4Q8VHY0 Gm14494-201ENSMUST00000118786 435 ntBASIC14.59□□□□□ -0.07
Cspg4Q8VHY0 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Cspg4Q8VHY0 AC108846.1-201ENSMUST00000214531 513 ntBASIC14.59□□□□□ -0.07
Cspg4Q8VHY0 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Cspg4Q8VHY0 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC14.59□□□□□ -0.07
Cspg4Q8VHY0 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC14.59□□□□□ -0.07
Cspg4Q8VHY0 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Cspg4Q8VHY0 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.07
Cspg4Q8VHY0 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Cspg4Q8VHY0 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.07
Cspg4Q8VHY0 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Cspg4Q8VHY0 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Cspg4Q8VHY0 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
Cspg4Q8VHY0 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Cspg4Q8VHY0 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Cspg4Q8VHY0 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Cspg4Q8VHY0 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC14.58□□□□□ -0.08
Cspg4Q8VHY0 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC14.58□□□□□ -0.08
Cspg4Q8VHY0 Rprl3-201ENSMUST00000157400 290 ntBASIC14.58□□□□□ -0.08
Cspg4Q8VHY0 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
Cspg4Q8VHY0 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Cspg4Q8VHY0 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Cspg4Q8VHY0 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Cspg4Q8VHY0 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Cspg4Q8VHY0 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Cspg4Q8VHY0 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC14.58□□□□□ -0.08
Cspg4Q8VHY0 Gm1818-201ENSMUST00000169406 1184 ntBASIC14.58□□□□□ -0.08
Cspg4Q8VHY0 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Cspg4Q8VHY0 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Cspg4Q8VHY0 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Cspg4Q8VHY0 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC14.58□□□□□ -0.08
Cspg4Q8VHY0 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC14.58□□□□□ -0.08
Cspg4Q8VHY0 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Cspg4Q8VHY0 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Cspg4Q8VHY0 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Cspg4Q8VHY0 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cspg4Q8VHY0 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cspg4Q8VHY0 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cspg4Q8VHY0 Phf7-203ENSMUST00000226565 1971 ntBASIC14.57□□□□□ -0.08
Cspg4Q8VHY0 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cspg4Q8VHY0 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC14.57□□□□□ -0.08
Cspg4Q8VHY0 Dpm3-202ENSMUST00000107462 827 ntAPPRIS P1 TSL 3 BASIC14.57□□□□□ -0.08
Cspg4Q8VHY0 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cspg4Q8VHY0 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC14.57□□□□□ -0.08
Cspg4Q8VHY0 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC14.57□□□□□ -0.08
Cspg4Q8VHY0 Gm26308-201ENSMUST00000157768 69 ntBASIC14.57□□□□□ -0.08
Cspg4Q8VHY0 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
Cspg4Q8VHY0 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
Cspg4Q8VHY0 Gm27867-201ENSMUST00000184778 125 ntBASIC14.57□□□□□ -0.08
Cspg4Q8VHY0 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cspg4Q8VHY0 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cspg4Q8VHY0 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC14.57□□□□□ -0.08
Cspg4Q8VHY0 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cspg4Q8VHY0 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cspg4Q8VHY0 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cspg4Q8VHY0 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cspg4Q8VHY0 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cspg4Q8VHY0 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cspg4Q8VHY0 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 42.2 ms