Protein–RNA interactions for Protein: Q8VEE4

Rpa1, Replication protein A 70 kDa DNA-binding subunit, mousemouse

Known RBP Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpa1Q8VEE4 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
Rpa1Q8VEE4 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC17.16■□□□□ 0.34
Rpa1Q8VEE4 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Rpa1Q8VEE4 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Rpa1Q8VEE4 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC17.15■□□□□ 0.34
Rpa1Q8VEE4 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Rpa1Q8VEE4 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Rpa1Q8VEE4 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Rpa1Q8VEE4 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC17.15■□□□□ 0.34
Rpa1Q8VEE4 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Rpa1Q8VEE4 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC17.15■□□□□ 0.34
Rpa1Q8VEE4 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Rpa1Q8VEE4 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Rpa1Q8VEE4 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC17.15■□□□□ 0.34
Rpa1Q8VEE4 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Rpa1Q8VEE4 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC17.15■□□□□ 0.34
Rpa1Q8VEE4 Gm13509-201ENSMUST00000119733 1308 ntBASIC17.15■□□□□ 0.34
Rpa1Q8VEE4 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Rpa1Q8VEE4 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Rpa1Q8VEE4 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Rpa1Q8VEE4 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Rpa1Q8VEE4 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Rpa1Q8VEE4 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Rpa1Q8VEE4 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Rpa1Q8VEE4 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Rpa1Q8VEE4 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Rpa1Q8VEE4 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Rpa1Q8VEE4 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
Rpa1Q8VEE4 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Rpa1Q8VEE4 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC17.14■□□□□ 0.33
Rpa1Q8VEE4 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Rpa1Q8VEE4 Gm42642-201ENSMUST00000200683 355 ntBASIC17.14■□□□□ 0.33
Rpa1Q8VEE4 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Rpa1Q8VEE4 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Rpa1Q8VEE4 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC17.14■□□□□ 0.33
Rpa1Q8VEE4 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Rpa1Q8VEE4 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
Rpa1Q8VEE4 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Rpa1Q8VEE4 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Rpa1Q8VEE4 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Rpa1Q8VEE4 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC17.14■□□□□ 0.33
Rpa1Q8VEE4 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC17.13■□□□□ 0.33
Rpa1Q8VEE4 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Rpa1Q8VEE4 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rpa1Q8VEE4 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rpa1Q8VEE4 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC17.13■□□□□ 0.33
Rpa1Q8VEE4 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rpa1Q8VEE4 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Rpa1Q8VEE4 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Rpa1Q8VEE4 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rpa1Q8VEE4 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rpa1Q8VEE4 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Rpa1Q8VEE4 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC17.13■□□□□ 0.33
Rpa1Q8VEE4 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Rpa1Q8VEE4 Gm7514-201ENSMUST00000209475 934 ntBASIC17.13■□□□□ 0.33
Rpa1Q8VEE4 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rpa1Q8VEE4 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC17.13■□□□□ 0.33
Rpa1Q8VEE4 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rpa1Q8VEE4 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rpa1Q8VEE4 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rpa1Q8VEE4 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rpa1Q8VEE4 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rpa1Q8VEE4 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rpa1Q8VEE4 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rpa1Q8VEE4 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rpa1Q8VEE4 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
Rpa1Q8VEE4 Tfap2a-209ENSMUST00000225180 1828 ntBASIC17.12■□□□□ 0.33
Rpa1Q8VEE4 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rpa1Q8VEE4 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rpa1Q8VEE4 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Rpa1Q8VEE4 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Rpa1Q8VEE4 Gm13401-201ENSMUST00000117074 291 ntBASIC17.12■□□□□ 0.33
Rpa1Q8VEE4 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Rpa1Q8VEE4 Gm18671-201ENSMUST00000214826 683 ntBASIC17.12■□□□□ 0.33
Rpa1Q8VEE4 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rpa1Q8VEE4 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Rpa1Q8VEE4 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rpa1Q8VEE4 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rpa1Q8VEE4 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rpa1Q8VEE4 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rpa1Q8VEE4 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Rpa1Q8VEE4 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rpa1Q8VEE4 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rpa1Q8VEE4 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rpa1Q8VEE4 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rpa1Q8VEE4 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rpa1Q8VEE4 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Rpa1Q8VEE4 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rpa1Q8VEE4 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Rpa1Q8VEE4 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rpa1Q8VEE4 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC17.11■□□□□ 0.33
Rpa1Q8VEE4 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
Rpa1Q8VEE4 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Rpa1Q8VEE4 Gm10033-202ENSMUST00000211874 928 ntBASIC17.11■□□□□ 0.33
Rpa1Q8VEE4 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Rpa1Q8VEE4 Gm36858-201ENSMUST00000194501 2391 ntBASIC17.11■□□□□ 0.33
Rpa1Q8VEE4 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Rpa1Q8VEE4 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Rpa1Q8VEE4 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rpa1Q8VEE4 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 25.4 ms