Protein–RNA interactions for Protein: Q8R550

Sh3kbp1, SH3 domain-containing kinase-binding protein 1, mousemouse

Known RBP Predictions only

Length 709 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3kbp1Q8R550 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
Sh3kbp1Q8R550 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
Sh3kbp1Q8R550 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Sh3kbp1Q8R550 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Sh3kbp1Q8R550 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Sh3kbp1Q8R550 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC17.54■□□□□ 0.4
Sh3kbp1Q8R550 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Sh3kbp1Q8R550 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Sh3kbp1Q8R550 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Sh3kbp1Q8R550 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Sh3kbp1Q8R550 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Sh3kbp1Q8R550 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
Sh3kbp1Q8R550 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Sh3kbp1Q8R550 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
Sh3kbp1Q8R550 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Sh3kbp1Q8R550 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Sh3kbp1Q8R550 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Sh3kbp1Q8R550 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Sh3kbp1Q8R550 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Sh3kbp1Q8R550 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
Sh3kbp1Q8R550 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Sh3kbp1Q8R550 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
Sh3kbp1Q8R550 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Sh3kbp1Q8R550 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Sh3kbp1Q8R550 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC17.53■□□□□ 0.4
Sh3kbp1Q8R550 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Sh3kbp1Q8R550 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Sh3kbp1Q8R550 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Sh3kbp1Q8R550 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Sh3kbp1Q8R550 Gm10013-201ENSMUST00000106074 672 ntBASIC17.53■□□□□ 0.4
Sh3kbp1Q8R550 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Sh3kbp1Q8R550 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Sh3kbp1Q8R550 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
Sh3kbp1Q8R550 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC17.53■□□□□ 0.4
Sh3kbp1Q8R550 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
Sh3kbp1Q8R550 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC17.53■□□□□ 0.4
Sh3kbp1Q8R550 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Sh3kbp1Q8R550 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Sh3kbp1Q8R550 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Sh3kbp1Q8R550 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC17.52■□□□□ 0.4
Sh3kbp1Q8R550 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
Sh3kbp1Q8R550 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
Sh3kbp1Q8R550 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Sh3kbp1Q8R550 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Sh3kbp1Q8R550 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Sh3kbp1Q8R550 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC17.52■□□□□ 0.4
Sh3kbp1Q8R550 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Sh3kbp1Q8R550 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Sh3kbp1Q8R550 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC17.52■□□□□ 0.4
Sh3kbp1Q8R550 Gm6728-201ENSMUST00000178117 1065 ntBASIC17.52■□□□□ 0.4
Sh3kbp1Q8R550 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Sh3kbp1Q8R550 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Sh3kbp1Q8R550 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Sh3kbp1Q8R550 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Sh3kbp1Q8R550 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.39
Sh3kbp1Q8R550 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.39
Sh3kbp1Q8R550 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Sh3kbp1Q8R550 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Sh3kbp1Q8R550 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Sh3kbp1Q8R550 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Sh3kbp1Q8R550 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
Sh3kbp1Q8R550 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Sh3kbp1Q8R550 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Sh3kbp1Q8R550 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Sh3kbp1Q8R550 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Sh3kbp1Q8R550 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Sh3kbp1Q8R550 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Sh3kbp1Q8R550 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Sh3kbp1Q8R550 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Sh3kbp1Q8R550 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Sh3kbp1Q8R550 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Sh3kbp1Q8R550 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC17.51■□□□□ 0.39
Sh3kbp1Q8R550 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Sh3kbp1Q8R550 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Sh3kbp1Q8R550 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
Sh3kbp1Q8R550 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Sh3kbp1Q8R550 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
Sh3kbp1Q8R550 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Sh3kbp1Q8R550 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Sh3kbp1Q8R550 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Sh3kbp1Q8R550 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Sh3kbp1Q8R550 Gm6345-202ENSMUST00000180900 204 ntBASIC17.5■□□□□ 0.39
Sh3kbp1Q8R550 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC17.5■□□□□ 0.39
Sh3kbp1Q8R550 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC17.5■□□□□ 0.39
Sh3kbp1Q8R550 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Sh3kbp1Q8R550 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC17.5■□□□□ 0.39
Sh3kbp1Q8R550 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC17.5■□□□□ 0.39
Sh3kbp1Q8R550 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Sh3kbp1Q8R550 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Sh3kbp1Q8R550 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Sh3kbp1Q8R550 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Sh3kbp1Q8R550 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Sh3kbp1Q8R550 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Sh3kbp1Q8R550 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
Sh3kbp1Q8R550 AC125311.2-201ENSMUST00000227477 1940 ntBASIC17.49■□□□□ 0.39
Sh3kbp1Q8R550 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Sh3kbp1Q8R550 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC17.49■□□□□ 0.39
Sh3kbp1Q8R550 AA414768-201ENSMUST00000121924 1257 ntBASIC17.49■□□□□ 0.39
Sh3kbp1Q8R550 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Sh3kbp1Q8R550 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 32.5 ms