Protein–RNA interactions for Protein: Q8R4U6

Top1mt, DNA topoisomerase I, mitochondrial, mousemouse

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Top1mtQ8R4U6 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC20.35■□□□□ 0.85
Top1mtQ8R4U6 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Top1mtQ8R4U6 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Top1mtQ8R4U6 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Top1mtQ8R4U6 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Top1mtQ8R4U6 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC20.35■□□□□ 0.85
Top1mtQ8R4U6 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC20.35■□□□□ 0.85
Top1mtQ8R4U6 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Top1mtQ8R4U6 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Top1mtQ8R4U6 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Top1mtQ8R4U6 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
Top1mtQ8R4U6 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC20.34■□□□□ 0.85
Top1mtQ8R4U6 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Top1mtQ8R4U6 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC20.34■□□□□ 0.85
Top1mtQ8R4U6 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Top1mtQ8R4U6 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Top1mtQ8R4U6 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Top1mtQ8R4U6 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC20.34■□□□□ 0.85
Top1mtQ8R4U6 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Top1mtQ8R4U6 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Top1mtQ8R4U6 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Top1mtQ8R4U6 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Top1mtQ8R4U6 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Top1mtQ8R4U6 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC20.34■□□□□ 0.85
Top1mtQ8R4U6 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Top1mtQ8R4U6 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Top1mtQ8R4U6 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC20.33■□□□□ 0.85
Top1mtQ8R4U6 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
Top1mtQ8R4U6 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.85
Top1mtQ8R4U6 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.85
Top1mtQ8R4U6 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Top1mtQ8R4U6 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Top1mtQ8R4U6 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.84
Top1mtQ8R4U6 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Top1mtQ8R4U6 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
Top1mtQ8R4U6 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC20.32■□□□□ 0.84
Top1mtQ8R4U6 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Top1mtQ8R4U6 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
Top1mtQ8R4U6 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Top1mtQ8R4U6 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
Top1mtQ8R4U6 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Top1mtQ8R4U6 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Top1mtQ8R4U6 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Top1mtQ8R4U6 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
Top1mtQ8R4U6 Gm27000-201ENSMUST00000182943 842 ntBASIC20.32■□□□□ 0.84
Top1mtQ8R4U6 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Top1mtQ8R4U6 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Top1mtQ8R4U6 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Top1mtQ8R4U6 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC20.32■□□□□ 0.84
Top1mtQ8R4U6 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Top1mtQ8R4U6 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC20.32■□□□□ 0.84
Top1mtQ8R4U6 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Top1mtQ8R4U6 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC20.31■□□□□ 0.84
Top1mtQ8R4U6 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
Top1mtQ8R4U6 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Top1mtQ8R4U6 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
Top1mtQ8R4U6 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC20.31■□□□□ 0.84
Top1mtQ8R4U6 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Top1mtQ8R4U6 AC135963.1-201ENSMUST00000211640 717 ntBASIC20.31■□□□□ 0.84
Top1mtQ8R4U6 Gm5417-201ENSMUST00000079706 384 ntBASIC20.31■□□□□ 0.84
Top1mtQ8R4U6 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Top1mtQ8R4U6 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Top1mtQ8R4U6 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC20.3■□□□□ 0.84
Top1mtQ8R4U6 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Top1mtQ8R4U6 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
Top1mtQ8R4U6 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Top1mtQ8R4U6 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
Top1mtQ8R4U6 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Top1mtQ8R4U6 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
Top1mtQ8R4U6 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Top1mtQ8R4U6 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
Top1mtQ8R4U6 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Top1mtQ8R4U6 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
Top1mtQ8R4U6 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Top1mtQ8R4U6 Gm9484-201ENSMUST00000195892 1159 ntBASIC20.3■□□□□ 0.84
Top1mtQ8R4U6 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC20.3■□□□□ 0.84
Top1mtQ8R4U6 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
Top1mtQ8R4U6 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Top1mtQ8R4U6 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Top1mtQ8R4U6 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Top1mtQ8R4U6 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Top1mtQ8R4U6 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Top1mtQ8R4U6 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Top1mtQ8R4U6 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Top1mtQ8R4U6 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Top1mtQ8R4U6 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Top1mtQ8R4U6 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Top1mtQ8R4U6 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
Top1mtQ8R4U6 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Top1mtQ8R4U6 AL590614.2-201ENSMUST00000225374 1937 ntBASIC20.29■□□□□ 0.84
Top1mtQ8R4U6 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
Top1mtQ8R4U6 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Top1mtQ8R4U6 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
Top1mtQ8R4U6 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC20.29■□□□□ 0.84
Top1mtQ8R4U6 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Top1mtQ8R4U6 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC20.29■□□□□ 0.84
Top1mtQ8R4U6 AL672049.1-201ENSMUST00000197943 91 ntBASIC20.29■□□□□ 0.84
Top1mtQ8R4U6 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC20.29■□□□□ 0.84
Top1mtQ8R4U6 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Top1mtQ8R4U6 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Retrieved 100 of 76,532 protein–RNA pairs in 61.3 ms