Protein–RNA interactions for Protein: Q8R4R6

Nup35, Nucleoporin NUP53, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup35Q8R4R6 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC13.9□□□□□ -0.18
Nup35Q8R4R6 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
Nup35Q8R4R6 Gm7290-201ENSMUST00000104990 617 ntBASIC13.9□□□□□ -0.18
Nup35Q8R4R6 Gm12918-201ENSMUST00000120234 636 ntBASIC13.9□□□□□ -0.18
Nup35Q8R4R6 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC13.9□□□□□ -0.18
Nup35Q8R4R6 Gm15710-201ENSMUST00000121821 636 ntBASIC13.9□□□□□ -0.18
Nup35Q8R4R6 Gm6211-202ENSMUST00000167849 925 ntBASIC13.9□□□□□ -0.18
Nup35Q8R4R6 Gm5075-201ENSMUST00000196916 622 ntBASIC13.9□□□□□ -0.18
Nup35Q8R4R6 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC13.9□□□□□ -0.18
Nup35Q8R4R6 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC13.9□□□□□ -0.18
Nup35Q8R4R6 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Nup35Q8R4R6 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
Nup35Q8R4R6 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Nup35Q8R4R6 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Nup35Q8R4R6 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Nup35Q8R4R6 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Nup35Q8R4R6 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC13.9□□□□□ -0.18
Nup35Q8R4R6 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Nup35Q8R4R6 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC13.9□□□□□ -0.18
Nup35Q8R4R6 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Nup35Q8R4R6 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC13.9□□□□□ -0.18
Nup35Q8R4R6 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Nup35Q8R4R6 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Nup35Q8R4R6 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Nup35Q8R4R6 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Nup35Q8R4R6 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Nup35Q8R4R6 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Nup35Q8R4R6 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Nup35Q8R4R6 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Nup35Q8R4R6 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Nup35Q8R4R6 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
Nup35Q8R4R6 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Nup35Q8R4R6 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Nup35Q8R4R6 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Nup35Q8R4R6 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC13.89□□□□□ -0.19
Nup35Q8R4R6 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
Nup35Q8R4R6 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Nup35Q8R4R6 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Nup35Q8R4R6 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Nup35Q8R4R6 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Nup35Q8R4R6 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Nup35Q8R4R6 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Nup35Q8R4R6 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Nup35Q8R4R6 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC13.89□□□□□ -0.19
Nup35Q8R4R6 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Nup35Q8R4R6 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Nup35Q8R4R6 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC13.89□□□□□ -0.19
Nup35Q8R4R6 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Nup35Q8R4R6 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Nup35Q8R4R6 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Nup35Q8R4R6 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC13.88□□□□□ -0.19
Nup35Q8R4R6 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Nup35Q8R4R6 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
Nup35Q8R4R6 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Nup35Q8R4R6 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Nup35Q8R4R6 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Nup35Q8R4R6 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Nup35Q8R4R6 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Nup35Q8R4R6 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC13.88□□□□□ -0.19
Nup35Q8R4R6 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Nup35Q8R4R6 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Nup35Q8R4R6 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Nup35Q8R4R6 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Nup35Q8R4R6 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Nup35Q8R4R6 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Nup35Q8R4R6 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Nup35Q8R4R6 Gm11927-201ENSMUST00000118472 759 ntBASIC13.88□□□□□ -0.19
Nup35Q8R4R6 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Nup35Q8R4R6 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC13.88□□□□□ -0.19
Nup35Q8R4R6 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Nup35Q8R4R6 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
Nup35Q8R4R6 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Nup35Q8R4R6 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
Nup35Q8R4R6 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
Nup35Q8R4R6 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Nup35Q8R4R6 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
Nup35Q8R4R6 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Nup35Q8R4R6 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Nup35Q8R4R6 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Nup35Q8R4R6 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Nup35Q8R4R6 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Nup35Q8R4R6 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Nup35Q8R4R6 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Nup35Q8R4R6 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Nup35Q8R4R6 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC13.87□□□□□ -0.19
Nup35Q8R4R6 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Nup35Q8R4R6 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC13.87□□□□□ -0.19
Nup35Q8R4R6 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Nup35Q8R4R6 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Nup35Q8R4R6 Gm10654-201ENSMUST00000098653 1633 ntBASIC13.87□□□□□ -0.19
Nup35Q8R4R6 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
Nup35Q8R4R6 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Nup35Q8R4R6 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Nup35Q8R4R6 Mir6349-201ENSMUST00000184059 97 ntBASIC13.87□□□□□ -0.19
Nup35Q8R4R6 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Nup35Q8R4R6 Gm42642-201ENSMUST00000200683 355 ntBASIC13.87□□□□□ -0.19
Nup35Q8R4R6 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC13.87□□□□□ -0.19
Nup35Q8R4R6 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC13.87□□□□□ -0.19
Nup35Q8R4R6 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Nup35Q8R4R6 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 28.2 ms