Protein–RNA interactions for Protein: Q8R422

Cd109, CD109 antigen, mousemouse

Predictions only

Length 1,442 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd109Q8R422 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
Cd109Q8R422 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC24.08■■□□□ 1.45
Cd109Q8R422 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
Cd109Q8R422 Fam105a-203ENSMUST00000226170 3043 ntBASIC24.08■■□□□ 1.45
Cd109Q8R422 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC24.08■■□□□ 1.45
Cd109Q8R422 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC24.08■■□□□ 1.44
Cd109Q8R422 AC153794.1-201ENSMUST00000169148 126 ntBASIC24.08■■□□□ 1.44
Cd109Q8R422 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC24.08■■□□□ 1.44
Cd109Q8R422 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.44
Cd109Q8R422 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC24.08■■□□□ 1.44
Cd109Q8R422 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC24.07■■□□□ 1.44
Cd109Q8R422 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
Cd109Q8R422 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
Cd109Q8R422 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
Cd109Q8R422 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
Cd109Q8R422 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC24.07■■□□□ 1.44
Cd109Q8R422 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
Cd109Q8R422 Gm42939-201ENSMUST00000197514 2205 ntBASIC24.07■■□□□ 1.44
Cd109Q8R422 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC24.07■■□□□ 1.44
Cd109Q8R422 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
Cd109Q8R422 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC24.07■■□□□ 1.44
Cd109Q8R422 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
Cd109Q8R422 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
Cd109Q8R422 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC24.07■■□□□ 1.44
Cd109Q8R422 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC24.07■■□□□ 1.44
Cd109Q8R422 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC24.07■■□□□ 1.44
Cd109Q8R422 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC24.07■■□□□ 1.44
Cd109Q8R422 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
Cd109Q8R422 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC24.07■■□□□ 1.44
Cd109Q8R422 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC24.07■■□□□ 1.44
Cd109Q8R422 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
Cd109Q8R422 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
Cd109Q8R422 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC24.06■■□□□ 1.44
Cd109Q8R422 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC24.06■■□□□ 1.44
Cd109Q8R422 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
Cd109Q8R422 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC24.06■■□□□ 1.44
Cd109Q8R422 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC24.06■■□□□ 1.44
Cd109Q8R422 Zcchc6-207ENSMUST00000225576 2499 ntBASIC24.06■■□□□ 1.44
Cd109Q8R422 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC24.06■■□□□ 1.44
Cd109Q8R422 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
Cd109Q8R422 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
Cd109Q8R422 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
Cd109Q8R422 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
Cd109Q8R422 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC24.06■■□□□ 1.44
Cd109Q8R422 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
Cd109Q8R422 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
Cd109Q8R422 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
Cd109Q8R422 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
Cd109Q8R422 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
Cd109Q8R422 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
Cd109Q8R422 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC24.05■■□□□ 1.44
Cd109Q8R422 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC24.05■■□□□ 1.44
Cd109Q8R422 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC24.05■■□□□ 1.44
Cd109Q8R422 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC24.05■■□□□ 1.44
Cd109Q8R422 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
Cd109Q8R422 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC24.05■■□□□ 1.44
Cd109Q8R422 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC24.05■■□□□ 1.44
Cd109Q8R422 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
Cd109Q8R422 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
Cd109Q8R422 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
Cd109Q8R422 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
Cd109Q8R422 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
Cd109Q8R422 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC24.05■■□□□ 1.44
Cd109Q8R422 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC24.05■■□□□ 1.44
Cd109Q8R422 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
Cd109Q8R422 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
Cd109Q8R422 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
Cd109Q8R422 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
Cd109Q8R422 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC24.04■■□□□ 1.44
Cd109Q8R422 Gm13312-201ENSMUST00000119631 718 ntBASIC24.04■■□□□ 1.44
Cd109Q8R422 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC24.04■■□□□ 1.44
Cd109Q8R422 Gm5864-201ENSMUST00000202263 970 ntBASIC24.04■■□□□ 1.44
Cd109Q8R422 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC24.04■■□□□ 1.44
Cd109Q8R422 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC24.04■■□□□ 1.44
Cd109Q8R422 Gm45203-201ENSMUST00000206384 1831 ntBASIC24.04■■□□□ 1.44
Cd109Q8R422 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC24.04■■□□□ 1.44
Cd109Q8R422 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
Cd109Q8R422 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC24.04■■□□□ 1.44
Cd109Q8R422 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
Cd109Q8R422 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC24.04■■□□□ 1.44
Cd109Q8R422 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC24.04■■□□□ 1.44
Cd109Q8R422 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
Cd109Q8R422 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC24.04■■□□□ 1.44
Cd109Q8R422 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
Cd109Q8R422 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC24.03■■□□□ 1.44
Cd109Q8R422 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
Cd109Q8R422 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC24.03■■□□□ 1.44
Cd109Q8R422 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC24.03■■□□□ 1.44
Cd109Q8R422 AC159301.1-201ENSMUST00000225130 1182 ntBASIC24.03■■□□□ 1.44
Cd109Q8R422 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
Cd109Q8R422 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
Cd109Q8R422 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC24.03■■□□□ 1.44
Cd109Q8R422 Gm43808-201ENSMUST00000202534 2065 ntBASIC24.03■■□□□ 1.44
Cd109Q8R422 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
Cd109Q8R422 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
Cd109Q8R422 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
Cd109Q8R422 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
Cd109Q8R422 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC24.03■■□□□ 1.44
Cd109Q8R422 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
Cd109Q8R422 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC24.03■■□□□ 1.44
Retrieved 100 of 76,532 protein–RNA pairs in 34.5 ms