Protein–RNA interactions for Protein: Q8R1J1

Tm6sf2, Transmembrane 6 superfamily member 2, mousemouse

Predictions only

Length 378 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tm6sf2Q8R1J1 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Tm6sf2Q8R1J1 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Tm6sf2Q8R1J1 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
Tm6sf2Q8R1J1 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC15.98■□□□□ 0.15
Tm6sf2Q8R1J1 Gm18101-201ENSMUST00000215769 548 ntBASIC15.98■□□□□ 0.15
Tm6sf2Q8R1J1 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Tm6sf2Q8R1J1 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC15.98■□□□□ 0.15
Tm6sf2Q8R1J1 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Tm6sf2Q8R1J1 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Tm6sf2Q8R1J1 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Tm6sf2Q8R1J1 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Tm6sf2Q8R1J1 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC15.97■□□□□ 0.15
Tm6sf2Q8R1J1 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Tm6sf2Q8R1J1 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Tm6sf2Q8R1J1 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Tm6sf2Q8R1J1 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Tm6sf2Q8R1J1 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Tm6sf2Q8R1J1 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Tm6sf2Q8R1J1 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Tm6sf2Q8R1J1 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC15.97■□□□□ 0.15
Tm6sf2Q8R1J1 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Tm6sf2Q8R1J1 Gm22697-201ENSMUST00000175194 63 ntBASIC15.97■□□□□ 0.15
Tm6sf2Q8R1J1 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
Tm6sf2Q8R1J1 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Tm6sf2Q8R1J1 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC15.97■□□□□ 0.15
Tm6sf2Q8R1J1 Gm7213-201ENSMUST00000215977 950 ntBASIC15.97■□□□□ 0.15
Tm6sf2Q8R1J1 Gm18032-201ENSMUST00000222541 538 ntBASIC15.97■□□□□ 0.15
Tm6sf2Q8R1J1 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Tm6sf2Q8R1J1 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Tm6sf2Q8R1J1 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
Tm6sf2Q8R1J1 Gm44832-201ENSMUST00000208849 2303 ntBASIC15.97■□□□□ 0.15
Tm6sf2Q8R1J1 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Tm6sf2Q8R1J1 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Tm6sf2Q8R1J1 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Tm6sf2Q8R1J1 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC15.97■□□□□ 0.15
Tm6sf2Q8R1J1 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Tm6sf2Q8R1J1 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Tm6sf2Q8R1J1 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Tm6sf2Q8R1J1 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Tm6sf2Q8R1J1 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Tm6sf2Q8R1J1 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Tm6sf2Q8R1J1 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Tm6sf2Q8R1J1 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.15
Tm6sf2Q8R1J1 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
Tm6sf2Q8R1J1 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
Tm6sf2Q8R1J1 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Tm6sf2Q8R1J1 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC15.96■□□□□ 0.15
Tm6sf2Q8R1J1 Gm10013-201ENSMUST00000106074 672 ntBASIC15.96■□□□□ 0.15
Tm6sf2Q8R1J1 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Tm6sf2Q8R1J1 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Tm6sf2Q8R1J1 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Tm6sf2Q8R1J1 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Tm6sf2Q8R1J1 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Tm6sf2Q8R1J1 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Tm6sf2Q8R1J1 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Tm6sf2Q8R1J1 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.15
Tm6sf2Q8R1J1 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Tm6sf2Q8R1J1 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Tm6sf2Q8R1J1 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Tm6sf2Q8R1J1 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Tm6sf2Q8R1J1 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
Tm6sf2Q8R1J1 Gm37811-201ENSMUST00000192416 2601 ntBASIC15.96■□□□□ 0.14
Tm6sf2Q8R1J1 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC15.96■□□□□ 0.14
Tm6sf2Q8R1J1 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
Tm6sf2Q8R1J1 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC15.95■□□□□ 0.14
Tm6sf2Q8R1J1 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
Tm6sf2Q8R1J1 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Tm6sf2Q8R1J1 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Tm6sf2Q8R1J1 Gm37519-201ENSMUST00000191687 2210 ntBASIC15.95■□□□□ 0.14
Tm6sf2Q8R1J1 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Tm6sf2Q8R1J1 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
Tm6sf2Q8R1J1 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Tm6sf2Q8R1J1 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Tm6sf2Q8R1J1 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Tm6sf2Q8R1J1 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC15.95■□□□□ 0.14
Tm6sf2Q8R1J1 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Tm6sf2Q8R1J1 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Tm6sf2Q8R1J1 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC15.95■□□□□ 0.14
Tm6sf2Q8R1J1 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC15.95■□□□□ 0.14
Tm6sf2Q8R1J1 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC15.95■□□□□ 0.14
Tm6sf2Q8R1J1 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Tm6sf2Q8R1J1 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Tm6sf2Q8R1J1 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Tm6sf2Q8R1J1 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Tm6sf2Q8R1J1 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Tm6sf2Q8R1J1 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC15.95■□□□□ 0.14
Tm6sf2Q8R1J1 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Tm6sf2Q8R1J1 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Tm6sf2Q8R1J1 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Tm6sf2Q8R1J1 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Tm6sf2Q8R1J1 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
Tm6sf2Q8R1J1 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Tm6sf2Q8R1J1 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
Tm6sf2Q8R1J1 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC15.94■□□□□ 0.14
Tm6sf2Q8R1J1 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC15.94■□□□□ 0.14
Tm6sf2Q8R1J1 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Tm6sf2Q8R1J1 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Tm6sf2Q8R1J1 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC15.94■□□□□ 0.14
Tm6sf2Q8R1J1 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Tm6sf2Q8R1J1 Gm43808-201ENSMUST00000202534 2065 ntBASIC15.94■□□□□ 0.14
Retrieved 100 of 76,532 protein–RNA pairs in 43.9 ms