Protein–RNA interactions for Protein: Q8CI96

Clip4, CAP-Gly domain-containing linker protein 4, mousemouse

Predictions only

Length 704 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clip4Q8CI96 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Clip4Q8CI96 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Clip4Q8CI96 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Clip4Q8CI96 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Clip4Q8CI96 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Clip4Q8CI96 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Clip4Q8CI96 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Clip4Q8CI96 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC17.13■□□□□ 0.33
Clip4Q8CI96 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Clip4Q8CI96 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC17.13■□□□□ 0.33
Clip4Q8CI96 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Clip4Q8CI96 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
Clip4Q8CI96 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Clip4Q8CI96 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Clip4Q8CI96 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Clip4Q8CI96 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Clip4Q8CI96 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Clip4Q8CI96 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Clip4Q8CI96 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Clip4Q8CI96 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Clip4Q8CI96 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Clip4Q8CI96 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Clip4Q8CI96 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Clip4Q8CI96 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Clip4Q8CI96 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Clip4Q8CI96 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Clip4Q8CI96 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
Clip4Q8CI96 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Clip4Q8CI96 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Clip4Q8CI96 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Clip4Q8CI96 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Clip4Q8CI96 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Clip4Q8CI96 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Clip4Q8CI96 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Clip4Q8CI96 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Clip4Q8CI96 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Clip4Q8CI96 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Clip4Q8CI96 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Clip4Q8CI96 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Clip4Q8CI96 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Clip4Q8CI96 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Clip4Q8CI96 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Clip4Q8CI96 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Clip4Q8CI96 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Clip4Q8CI96 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Clip4Q8CI96 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Clip4Q8CI96 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC17.11■□□□□ 0.33
Clip4Q8CI96 Mir5122-201ENSMUST00000175004 89 ntBASIC17.11■□□□□ 0.33
Clip4Q8CI96 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Clip4Q8CI96 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Clip4Q8CI96 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Clip4Q8CI96 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC17.11■□□□□ 0.33
Clip4Q8CI96 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Clip4Q8CI96 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Clip4Q8CI96 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Clip4Q8CI96 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Clip4Q8CI96 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Clip4Q8CI96 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Clip4Q8CI96 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Clip4Q8CI96 Gm28265-201ENSMUST00000188201 2319 ntBASIC17.1■□□□□ 0.33
Clip4Q8CI96 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Clip4Q8CI96 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC17.1■□□□□ 0.33
Clip4Q8CI96 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Clip4Q8CI96 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC17.1■□□□□ 0.33
Clip4Q8CI96 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Clip4Q8CI96 Gm37055-201ENSMUST00000191866 133 ntBASIC17.1■□□□□ 0.33
Clip4Q8CI96 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC17.1■□□□□ 0.33
Clip4Q8CI96 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Clip4Q8CI96 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Clip4Q8CI96 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Clip4Q8CI96 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Clip4Q8CI96 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Clip4Q8CI96 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Clip4Q8CI96 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Clip4Q8CI96 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Clip4Q8CI96 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Clip4Q8CI96 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Clip4Q8CI96 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC17.09■□□□□ 0.33
Clip4Q8CI96 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Clip4Q8CI96 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Clip4Q8CI96 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Clip4Q8CI96 Gm9484-201ENSMUST00000195892 1159 ntBASIC17.09■□□□□ 0.33
Clip4Q8CI96 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Clip4Q8CI96 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Clip4Q8CI96 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Clip4Q8CI96 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Clip4Q8CI96 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC17.09■□□□□ 0.33
Clip4Q8CI96 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC17.09■□□□□ 0.33
Clip4Q8CI96 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Clip4Q8CI96 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Clip4Q8CI96 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC17.09■□□□□ 0.33
Clip4Q8CI96 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Clip4Q8CI96 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Clip4Q8CI96 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Clip4Q8CI96 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Clip4Q8CI96 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Clip4Q8CI96 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Clip4Q8CI96 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC17.09■□□□□ 0.33
Clip4Q8CI96 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Clip4Q8CI96 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC17.08■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 46.3 ms