Protein–RNA interactions for Protein: Q8C8B0

Alx1, ALX homeobox protein 1, mousemouse

Predictions only

Length 326 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alx1Q8C8B0 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
Alx1Q8C8B0 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
Alx1Q8C8B0 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Alx1Q8C8B0 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Alx1Q8C8B0 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Alx1Q8C8B0 Gm18115-201ENSMUST00000221209 621 ntBASIC19.86■□□□□ 0.77
Alx1Q8C8B0 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
Alx1Q8C8B0 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Alx1Q8C8B0 Gm16401-202ENSMUST00000197463 2074 ntBASIC19.86■□□□□ 0.77
Alx1Q8C8B0 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Alx1Q8C8B0 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
Alx1Q8C8B0 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Alx1Q8C8B0 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Alx1Q8C8B0 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Alx1Q8C8B0 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Alx1Q8C8B0 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Alx1Q8C8B0 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Alx1Q8C8B0 Gm15635-204ENSMUST00000208024 2539 ntBASIC19.85■□□□□ 0.77
Alx1Q8C8B0 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Alx1Q8C8B0 Gm11841-201ENSMUST00000117060 1963 ntBASIC19.85■□□□□ 0.77
Alx1Q8C8B0 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Alx1Q8C8B0 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Alx1Q8C8B0 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Alx1Q8C8B0 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Alx1Q8C8B0 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Alx1Q8C8B0 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC19.85■□□□□ 0.77
Alx1Q8C8B0 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Alx1Q8C8B0 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
Alx1Q8C8B0 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC19.85■□□□□ 0.77
Alx1Q8C8B0 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Alx1Q8C8B0 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC19.85■□□□□ 0.77
Alx1Q8C8B0 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Alx1Q8C8B0 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Alx1Q8C8B0 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Alx1Q8C8B0 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Alx1Q8C8B0 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Alx1Q8C8B0 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
Alx1Q8C8B0 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Alx1Q8C8B0 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC19.85■□□□□ 0.77
Alx1Q8C8B0 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Alx1Q8C8B0 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Alx1Q8C8B0 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Alx1Q8C8B0 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Alx1Q8C8B0 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Alx1Q8C8B0 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC19.84■□□□□ 0.77
Alx1Q8C8B0 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
Alx1Q8C8B0 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Alx1Q8C8B0 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Alx1Q8C8B0 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Alx1Q8C8B0 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC19.83■□□□□ 0.77
Alx1Q8C8B0 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC19.83■□□□□ 0.77
Alx1Q8C8B0 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Alx1Q8C8B0 Gm11355-201ENSMUST00000121120 306 ntBASIC19.83■□□□□ 0.77
Alx1Q8C8B0 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Alx1Q8C8B0 Gm44450-201ENSMUST00000199528 114 ntBASIC19.83■□□□□ 0.77
Alx1Q8C8B0 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Alx1Q8C8B0 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
Alx1Q8C8B0 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
Alx1Q8C8B0 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Alx1Q8C8B0 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Alx1Q8C8B0 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
Alx1Q8C8B0 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.76
Alx1Q8C8B0 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Alx1Q8C8B0 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Alx1Q8C8B0 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
Alx1Q8C8B0 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC19.82■□□□□ 0.76
Alx1Q8C8B0 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
Alx1Q8C8B0 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
Alx1Q8C8B0 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Alx1Q8C8B0 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
Alx1Q8C8B0 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Alx1Q8C8B0 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Alx1Q8C8B0 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC19.82■□□□□ 0.76
Alx1Q8C8B0 Gm23634-201ENSMUST00000175071 91 ntBASIC19.82■□□□□ 0.76
Alx1Q8C8B0 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Alx1Q8C8B0 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Alx1Q8C8B0 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC19.82■□□□□ 0.76
Alx1Q8C8B0 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
Alx1Q8C8B0 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
Alx1Q8C8B0 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Alx1Q8C8B0 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
Alx1Q8C8B0 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Alx1Q8C8B0 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
Alx1Q8C8B0 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
Alx1Q8C8B0 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Alx1Q8C8B0 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Alx1Q8C8B0 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
Alx1Q8C8B0 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Alx1Q8C8B0 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC19.81■□□□□ 0.76
Alx1Q8C8B0 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
Alx1Q8C8B0 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
Alx1Q8C8B0 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC19.81■□□□□ 0.76
Alx1Q8C8B0 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC19.81■□□□□ 0.76
Alx1Q8C8B0 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Alx1Q8C8B0 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Alx1Q8C8B0 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC19.81■□□□□ 0.76
Alx1Q8C8B0 AC121598.2-201ENSMUST00000228376 2325 ntBASIC19.81■□□□□ 0.76
Alx1Q8C8B0 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
Alx1Q8C8B0 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
Alx1Q8C8B0 Gm45203-201ENSMUST00000206384 1831 ntBASIC19.81■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 23.2 ms