Protein–RNA interactions for Protein: Q8C2S0

Usp44, Ubiquitin carboxyl-terminal hydrolase 44, mousemouse

Predictions only

Length 711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp44Q8C2S0 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
Usp44Q8C2S0 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Usp44Q8C2S0 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC19.9■□□□□ 0.78
Usp44Q8C2S0 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Usp44Q8C2S0 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Usp44Q8C2S0 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Usp44Q8C2S0 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Usp44Q8C2S0 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC19.9■□□□□ 0.78
Usp44Q8C2S0 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Usp44Q8C2S0 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
Usp44Q8C2S0 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Usp44Q8C2S0 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
Usp44Q8C2S0 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
Usp44Q8C2S0 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
Usp44Q8C2S0 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.78
Usp44Q8C2S0 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Usp44Q8C2S0 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
Usp44Q8C2S0 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC19.89■□□□□ 0.77
Usp44Q8C2S0 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Usp44Q8C2S0 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Usp44Q8C2S0 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
Usp44Q8C2S0 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
Usp44Q8C2S0 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Usp44Q8C2S0 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Usp44Q8C2S0 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
Usp44Q8C2S0 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Usp44Q8C2S0 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Usp44Q8C2S0 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Usp44Q8C2S0 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Usp44Q8C2S0 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Usp44Q8C2S0 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC19.89■□□□□ 0.77
Usp44Q8C2S0 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Usp44Q8C2S0 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Usp44Q8C2S0 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Usp44Q8C2S0 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
Usp44Q8C2S0 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Usp44Q8C2S0 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Usp44Q8C2S0 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Usp44Q8C2S0 Gm13186-201ENSMUST00000118031 316 ntBASIC19.88■□□□□ 0.77
Usp44Q8C2S0 Gm3272-201ENSMUST00000181181 1229 ntBASIC19.88■□□□□ 0.77
Usp44Q8C2S0 Gm18959-201ENSMUST00000208954 655 ntBASIC19.88■□□□□ 0.77
Usp44Q8C2S0 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC19.88■□□□□ 0.77
Usp44Q8C2S0 Gm10566-201ENSMUST00000086739 996 ntBASIC19.88■□□□□ 0.77
Usp44Q8C2S0 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Usp44Q8C2S0 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Usp44Q8C2S0 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Usp44Q8C2S0 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Usp44Q8C2S0 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
Usp44Q8C2S0 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Usp44Q8C2S0 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
Usp44Q8C2S0 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Usp44Q8C2S0 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Usp44Q8C2S0 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
Usp44Q8C2S0 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
Usp44Q8C2S0 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Usp44Q8C2S0 Mir5130-201ENSMUST00000175160 84 ntBASIC19.87■□□□□ 0.77
Usp44Q8C2S0 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC19.87■□□□□ 0.77
Usp44Q8C2S0 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Usp44Q8C2S0 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Usp44Q8C2S0 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Usp44Q8C2S0 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Usp44Q8C2S0 Gm45203-201ENSMUST00000206384 1831 ntBASIC19.87■□□□□ 0.77
Usp44Q8C2S0 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Usp44Q8C2S0 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Usp44Q8C2S0 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
Usp44Q8C2S0 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Usp44Q8C2S0 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Usp44Q8C2S0 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Usp44Q8C2S0 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Usp44Q8C2S0 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Usp44Q8C2S0 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Usp44Q8C2S0 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Usp44Q8C2S0 Gm9987-201ENSMUST00000069768 567 ntBASIC19.86■□□□□ 0.77
Usp44Q8C2S0 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Usp44Q8C2S0 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Usp44Q8C2S0 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Usp44Q8C2S0 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
Usp44Q8C2S0 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
Usp44Q8C2S0 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Usp44Q8C2S0 Gm8839-201ENSMUST00000121279 1645 ntBASIC19.85■□□□□ 0.77
Usp44Q8C2S0 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Usp44Q8C2S0 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Usp44Q8C2S0 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
Usp44Q8C2S0 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC19.85■□□□□ 0.77
Usp44Q8C2S0 Gm7213-201ENSMUST00000215977 950 ntBASIC19.85■□□□□ 0.77
Usp44Q8C2S0 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
Usp44Q8C2S0 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
Usp44Q8C2S0 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Usp44Q8C2S0 Gm36858-201ENSMUST00000194501 2391 ntBASIC19.85■□□□□ 0.77
Usp44Q8C2S0 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC19.85■□□□□ 0.77
Usp44Q8C2S0 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Usp44Q8C2S0 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Usp44Q8C2S0 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Usp44Q8C2S0 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
Usp44Q8C2S0 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Usp44Q8C2S0 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Usp44Q8C2S0 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Usp44Q8C2S0 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Usp44Q8C2S0 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
Usp44Q8C2S0 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 31.7 ms