Protein–RNA interactions for Protein: Q8BXQ3

Lrtm1, Leucine-rich repeat and transmembrane domain-containing protein 1, mousemouse

Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrtm1Q8BXQ3 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Lrtm1Q8BXQ3 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Lrtm1Q8BXQ3 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
Lrtm1Q8BXQ3 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Lrtm1Q8BXQ3 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Lrtm1Q8BXQ3 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Lrtm1Q8BXQ3 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
Lrtm1Q8BXQ3 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC14.86□□□□□ -0.03
Lrtm1Q8BXQ3 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Lrtm1Q8BXQ3 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
Lrtm1Q8BXQ3 Mir7071-201ENSMUST00000184847 69 ntBASIC14.86□□□□□ -0.03
Lrtm1Q8BXQ3 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC14.86□□□□□ -0.03
Lrtm1Q8BXQ3 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Lrtm1Q8BXQ3 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Lrtm1Q8BXQ3 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
Lrtm1Q8BXQ3 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Lrtm1Q8BXQ3 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Lrtm1Q8BXQ3 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Lrtm1Q8BXQ3 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
Lrtm1Q8BXQ3 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Lrtm1Q8BXQ3 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Lrtm1Q8BXQ3 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Lrtm1Q8BXQ3 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Lrtm1Q8BXQ3 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Lrtm1Q8BXQ3 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Lrtm1Q8BXQ3 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Lrtm1Q8BXQ3 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Lrtm1Q8BXQ3 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
Lrtm1Q8BXQ3 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Lrtm1Q8BXQ3 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Lrtm1Q8BXQ3 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
Lrtm1Q8BXQ3 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Lrtm1Q8BXQ3 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Lrtm1Q8BXQ3 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Lrtm1Q8BXQ3 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC14.85□□□□□ -0.03
Lrtm1Q8BXQ3 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC14.85□□□□□ -0.03
Lrtm1Q8BXQ3 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Lrtm1Q8BXQ3 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC14.85□□□□□ -0.03
Lrtm1Q8BXQ3 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
Lrtm1Q8BXQ3 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC14.85□□□□□ -0.03
Lrtm1Q8BXQ3 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Lrtm1Q8BXQ3 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Lrtm1Q8BXQ3 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Lrtm1Q8BXQ3 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Lrtm1Q8BXQ3 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Lrtm1Q8BXQ3 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Lrtm1Q8BXQ3 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Lrtm1Q8BXQ3 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Lrtm1Q8BXQ3 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Lrtm1Q8BXQ3 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Lrtm1Q8BXQ3 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Lrtm1Q8BXQ3 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Lrtm1Q8BXQ3 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Lrtm1Q8BXQ3 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Lrtm1Q8BXQ3 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Lrtm1Q8BXQ3 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Lrtm1Q8BXQ3 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Lrtm1Q8BXQ3 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC14.84□□□□□ -0.03
Lrtm1Q8BXQ3 Gm15635-204ENSMUST00000208024 2539 ntBASIC14.84□□□□□ -0.03
Lrtm1Q8BXQ3 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC14.84□□□□□ -0.03
Lrtm1Q8BXQ3 Gm27000-201ENSMUST00000182943 842 ntBASIC14.84□□□□□ -0.03
Lrtm1Q8BXQ3 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Lrtm1Q8BXQ3 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Lrtm1Q8BXQ3 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Lrtm1Q8BXQ3 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC14.84□□□□□ -0.03
Lrtm1Q8BXQ3 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Lrtm1Q8BXQ3 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
Lrtm1Q8BXQ3 Ddx41-204ENSMUST00000224765 2199 ntBASIC14.84□□□□□ -0.03
Lrtm1Q8BXQ3 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
Lrtm1Q8BXQ3 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Lrtm1Q8BXQ3 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Lrtm1Q8BXQ3 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Lrtm1Q8BXQ3 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Lrtm1Q8BXQ3 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Lrtm1Q8BXQ3 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Lrtm1Q8BXQ3 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Lrtm1Q8BXQ3 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC14.83□□□□□ -0.04
Lrtm1Q8BXQ3 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC14.83□□□□□ -0.04
Lrtm1Q8BXQ3 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Lrtm1Q8BXQ3 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC14.83□□□□□ -0.04
Lrtm1Q8BXQ3 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Lrtm1Q8BXQ3 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Lrtm1Q8BXQ3 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Lrtm1Q8BXQ3 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Lrtm1Q8BXQ3 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
Lrtm1Q8BXQ3 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC14.83□□□□□ -0.04
Lrtm1Q8BXQ3 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC14.82□□□□□ -0.04
Lrtm1Q8BXQ3 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC14.82□□□□□ -0.04
Lrtm1Q8BXQ3 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Lrtm1Q8BXQ3 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Lrtm1Q8BXQ3 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Lrtm1Q8BXQ3 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC14.82□□□□□ -0.04
Lrtm1Q8BXQ3 Gm29994-201ENSMUST00000195495 1193 ntBASIC14.82□□□□□ -0.04
Lrtm1Q8BXQ3 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Lrtm1Q8BXQ3 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Lrtm1Q8BXQ3 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
Lrtm1Q8BXQ3 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Lrtm1Q8BXQ3 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Lrtm1Q8BXQ3 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Lrtm1Q8BXQ3 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 50.6 ms