Protein–RNA interactions for Protein: Q8BRF7

Scfd1, Sec1 family domain-containing protein 1, mousemouse

Known RBP Predictions only

Length 639 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scfd1Q8BRF7 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Scfd1Q8BRF7 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Scfd1Q8BRF7 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
Scfd1Q8BRF7 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Scfd1Q8BRF7 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Scfd1Q8BRF7 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Scfd1Q8BRF7 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
Scfd1Q8BRF7 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Scfd1Q8BRF7 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Scfd1Q8BRF7 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Scfd1Q8BRF7 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Scfd1Q8BRF7 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
Scfd1Q8BRF7 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Scfd1Q8BRF7 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Scfd1Q8BRF7 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC19.43■□□□□ 0.7
Scfd1Q8BRF7 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Scfd1Q8BRF7 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC19.43■□□□□ 0.7
Scfd1Q8BRF7 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Scfd1Q8BRF7 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Scfd1Q8BRF7 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Scfd1Q8BRF7 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Scfd1Q8BRF7 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Scfd1Q8BRF7 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Scfd1Q8BRF7 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Scfd1Q8BRF7 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
Scfd1Q8BRF7 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC19.43■□□□□ 0.7
Scfd1Q8BRF7 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Scfd1Q8BRF7 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
Scfd1Q8BRF7 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
Scfd1Q8BRF7 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC19.43■□□□□ 0.7
Scfd1Q8BRF7 Gm27357-201ENSMUST00000183754 135 ntBASIC19.43■□□□□ 0.7
Scfd1Q8BRF7 Gm18669-201ENSMUST00000216049 778 ntBASIC19.43■□□□□ 0.7
Scfd1Q8BRF7 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Scfd1Q8BRF7 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Scfd1Q8BRF7 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Scfd1Q8BRF7 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Scfd1Q8BRF7 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Scfd1Q8BRF7 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
Scfd1Q8BRF7 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC19.43■□□□□ 0.7
Scfd1Q8BRF7 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
Scfd1Q8BRF7 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Scfd1Q8BRF7 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Scfd1Q8BRF7 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Scfd1Q8BRF7 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
Scfd1Q8BRF7 Gm28033-201ENSMUST00000184224 96 ntBASIC19.42■□□□□ 0.7
Scfd1Q8BRF7 Ighv6-1-201ENSMUST00000193612 343 ntBASIC19.42■□□□□ 0.7
Scfd1Q8BRF7 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Scfd1Q8BRF7 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
Scfd1Q8BRF7 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Scfd1Q8BRF7 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Scfd1Q8BRF7 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC19.42■□□□□ 0.7
Scfd1Q8BRF7 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC19.42■□□□□ 0.7
Scfd1Q8BRF7 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
Scfd1Q8BRF7 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Scfd1Q8BRF7 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Scfd1Q8BRF7 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Scfd1Q8BRF7 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Scfd1Q8BRF7 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Scfd1Q8BRF7 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Scfd1Q8BRF7 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
Scfd1Q8BRF7 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC19.41■□□□□ 0.7
Scfd1Q8BRF7 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC19.41■□□□□ 0.7
Scfd1Q8BRF7 Mir3081-201ENSMUST00000175305 84 ntBASIC19.41■□□□□ 0.7
Scfd1Q8BRF7 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Scfd1Q8BRF7 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC19.41■□□□□ 0.7
Scfd1Q8BRF7 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Scfd1Q8BRF7 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
Scfd1Q8BRF7 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Scfd1Q8BRF7 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Scfd1Q8BRF7 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Scfd1Q8BRF7 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
Scfd1Q8BRF7 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Scfd1Q8BRF7 Gm43182-201ENSMUST00000199476 2528 ntBASIC19.41■□□□□ 0.7
Scfd1Q8BRF7 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Scfd1Q8BRF7 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Scfd1Q8BRF7 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Scfd1Q8BRF7 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC19.4■□□□□ 0.7
Scfd1Q8BRF7 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC19.4■□□□□ 0.7
Scfd1Q8BRF7 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC19.4■□□□□ 0.7
Scfd1Q8BRF7 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC19.4■□□□□ 0.7
Scfd1Q8BRF7 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Scfd1Q8BRF7 Gm27741-201ENSMUST00000185060 237 ntBASIC19.4■□□□□ 0.7
Scfd1Q8BRF7 Gm44450-201ENSMUST00000199528 114 ntBASIC19.4■□□□□ 0.7
Scfd1Q8BRF7 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
Scfd1Q8BRF7 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
Scfd1Q8BRF7 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
Scfd1Q8BRF7 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC19.4■□□□□ 0.7
Scfd1Q8BRF7 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Scfd1Q8BRF7 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC19.4■□□□□ 0.7
Scfd1Q8BRF7 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Scfd1Q8BRF7 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC19.39■□□□□ 0.7
Scfd1Q8BRF7 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Scfd1Q8BRF7 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC19.39■□□□□ 0.7
Scfd1Q8BRF7 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Scfd1Q8BRF7 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Scfd1Q8BRF7 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Scfd1Q8BRF7 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC19.39■□□□□ 0.69
Scfd1Q8BRF7 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Scfd1Q8BRF7 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Scfd1Q8BRF7 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 22.5 ms