Protein–RNA interactions for Protein: Q8BR65

Suds3, Sin3 histone deacetylase corepressor complex component SDS3, mousemouse

Predictions only

Length 328 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Suds3Q8BR65 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Suds3Q8BR65 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC17.48■□□□□ 0.39
Suds3Q8BR65 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Suds3Q8BR65 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
Suds3Q8BR65 Rb1cc1-201ENSMUST00000027040 7607 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Suds3Q8BR65 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Suds3Q8BR65 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Suds3Q8BR65 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Suds3Q8BR65 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Suds3Q8BR65 Agap1-202ENSMUST00000074945 10069 ntTSL 5 BASIC17.47■□□□□ 0.39
Suds3Q8BR65 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
Suds3Q8BR65 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC17.47■□□□□ 0.39
Suds3Q8BR65 Gm12382-201ENSMUST00000122005 922 ntBASIC17.47■□□□□ 0.39
Suds3Q8BR65 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC17.47■□□□□ 0.39
Suds3Q8BR65 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Suds3Q8BR65 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Suds3Q8BR65 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Suds3Q8BR65 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC17.47■□□□□ 0.39
Suds3Q8BR65 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Suds3Q8BR65 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Suds3Q8BR65 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
Suds3Q8BR65 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Suds3Q8BR65 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Suds3Q8BR65 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Suds3Q8BR65 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC17.47■□□□□ 0.39
Suds3Q8BR65 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Suds3Q8BR65 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Suds3Q8BR65 Ankhd1-214ENSMUST00000155329 8223 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
Suds3Q8BR65 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Suds3Q8BR65 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Suds3Q8BR65 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
Suds3Q8BR65 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Suds3Q8BR65 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Suds3Q8BR65 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Suds3Q8BR65 Gm10418-201ENSMUST00000100943 576 ntBASIC17.46■□□□□ 0.39
Suds3Q8BR65 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Suds3Q8BR65 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC17.46■□□□□ 0.39
Suds3Q8BR65 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC17.46■□□□□ 0.39
Suds3Q8BR65 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Suds3Q8BR65 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Suds3Q8BR65 AC166341.7-201ENSMUST00000221698 126 ntBASIC17.46■□□□□ 0.39
Suds3Q8BR65 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
Suds3Q8BR65 Gm15743-202ENSMUST00000182690 1901 ntBASIC17.46■□□□□ 0.39
Suds3Q8BR65 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Suds3Q8BR65 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
Suds3Q8BR65 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Suds3Q8BR65 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Suds3Q8BR65 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Suds3Q8BR65 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
Suds3Q8BR65 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC17.46■□□□□ 0.38
Suds3Q8BR65 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Suds3Q8BR65 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Suds3Q8BR65 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC17.45■□□□□ 0.38
Suds3Q8BR65 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Suds3Q8BR65 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC17.45■□□□□ 0.38
Suds3Q8BR65 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC17.45■□□□□ 0.38
Suds3Q8BR65 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
Suds3Q8BR65 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
Suds3Q8BR65 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
Suds3Q8BR65 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC17.45■□□□□ 0.38
Suds3Q8BR65 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC17.45■□□□□ 0.38
Suds3Q8BR65 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Suds3Q8BR65 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Suds3Q8BR65 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
Suds3Q8BR65 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Suds3Q8BR65 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Suds3Q8BR65 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Suds3Q8BR65 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
Suds3Q8BR65 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Suds3Q8BR65 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
Suds3Q8BR65 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC17.44■□□□□ 0.38
Suds3Q8BR65 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Suds3Q8BR65 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Suds3Q8BR65 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC17.44■□□□□ 0.38
Suds3Q8BR65 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC17.44■□□□□ 0.38
Suds3Q8BR65 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
Suds3Q8BR65 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
Suds3Q8BR65 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Suds3Q8BR65 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Suds3Q8BR65 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Suds3Q8BR65 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
Suds3Q8BR65 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC17.44■□□□□ 0.38
Suds3Q8BR65 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC17.44■□□□□ 0.38
Suds3Q8BR65 Gm37055-201ENSMUST00000191866 133 ntBASIC17.44■□□□□ 0.38
Suds3Q8BR65 Gm37292-201ENSMUST00000192062 758 ntBASIC17.44■□□□□ 0.38
Suds3Q8BR65 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Suds3Q8BR65 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
Suds3Q8BR65 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Suds3Q8BR65 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
Suds3Q8BR65 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Suds3Q8BR65 Gm43598-201ENSMUST00000202482 2479 ntBASIC17.44■□□□□ 0.38
Suds3Q8BR65 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
Suds3Q8BR65 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Suds3Q8BR65 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
Suds3Q8BR65 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Suds3Q8BR65 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Suds3Q8BR65 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
Suds3Q8BR65 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC17.44■□□□□ 0.38
Suds3Q8BR65 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Suds3Q8BR65 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 20.1 ms