Protein–RNA interactions for Protein: Q8BK63

Csnk1a1, Casein kinase I isoform alpha, mousemouse

Known RBP Predictions only

Length 337 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Csnk1a1Q8BK63 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Csnk1a1Q8BK63 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Csnk1a1Q8BK63 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Csnk1a1Q8BK63 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Csnk1a1Q8BK63 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
Csnk1a1Q8BK63 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Csnk1a1Q8BK63 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Csnk1a1Q8BK63 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Csnk1a1Q8BK63 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Csnk1a1Q8BK63 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Csnk1a1Q8BK63 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Csnk1a1Q8BK63 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC15.13■□□□□ 0.01
Csnk1a1Q8BK63 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Csnk1a1Q8BK63 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Csnk1a1Q8BK63 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Csnk1a1Q8BK63 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
Csnk1a1Q8BK63 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Csnk1a1Q8BK63 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Csnk1a1Q8BK63 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Csnk1a1Q8BK63 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Csnk1a1Q8BK63 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC15.13■□□□□ 0.01
Csnk1a1Q8BK63 Gm9731-201ENSMUST00000209480 747 ntBASIC15.13■□□□□ 0.01
Csnk1a1Q8BK63 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Csnk1a1Q8BK63 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Csnk1a1Q8BK63 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Csnk1a1Q8BK63 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC15.13■□□□□ 0.01
Csnk1a1Q8BK63 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Csnk1a1Q8BK63 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Csnk1a1Q8BK63 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Csnk1a1Q8BK63 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC15.13■□□□□ 0.01
Csnk1a1Q8BK63 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Csnk1a1Q8BK63 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC15.12■□□□□ 0.01
Csnk1a1Q8BK63 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Csnk1a1Q8BK63 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Csnk1a1Q8BK63 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC15.12■□□□□ 0.01
Csnk1a1Q8BK63 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Csnk1a1Q8BK63 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Csnk1a1Q8BK63 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Csnk1a1Q8BK63 Gm7638-201ENSMUST00000121348 967 ntBASIC15.12■□□□□ 0.01
Csnk1a1Q8BK63 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC15.12■□□□□ 0.01
Csnk1a1Q8BK63 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC15.12■□□□□ 0.01
Csnk1a1Q8BK63 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC15.12■□□□□ 0.01
Csnk1a1Q8BK63 Mir5122-201ENSMUST00000175004 89 ntBASIC15.12■□□□□ 0.01
Csnk1a1Q8BK63 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC15.12■□□□□ 0.01
Csnk1a1Q8BK63 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC15.12■□□□□ 0.01
Csnk1a1Q8BK63 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC15.12■□□□□ 0.01
Csnk1a1Q8BK63 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Csnk1a1Q8BK63 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Csnk1a1Q8BK63 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Csnk1a1Q8BK63 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Csnk1a1Q8BK63 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Csnk1a1Q8BK63 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Csnk1a1Q8BK63 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Csnk1a1Q8BK63 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Csnk1a1Q8BK63 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
Csnk1a1Q8BK63 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Csnk1a1Q8BK63 Gm43338-201ENSMUST00000198617 2223 ntBASIC15.11■□□□□ 0.01
Csnk1a1Q8BK63 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Csnk1a1Q8BK63 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Csnk1a1Q8BK63 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Csnk1a1Q8BK63 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC15.11■□□□□ 0.01
Csnk1a1Q8BK63 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Csnk1a1Q8BK63 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Csnk1a1Q8BK63 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Csnk1a1Q8BK63 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Csnk1a1Q8BK63 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Csnk1a1Q8BK63 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Csnk1a1Q8BK63 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Csnk1a1Q8BK63 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Csnk1a1Q8BK63 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Csnk1a1Q8BK63 Gm5898-201ENSMUST00000121016 2071 ntBASIC15.11■□□□□ 0.01
Csnk1a1Q8BK63 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
Csnk1a1Q8BK63 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Csnk1a1Q8BK63 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Csnk1a1Q8BK63 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Csnk1a1Q8BK63 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
Csnk1a1Q8BK63 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Csnk1a1Q8BK63 AC121598.2-201ENSMUST00000228376 2325 ntBASIC15.1■□□□□ 0.01
Csnk1a1Q8BK63 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Csnk1a1Q8BK63 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC15.1■□□□□ 0.01
Csnk1a1Q8BK63 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC15.1■□□□□ 0.01
Csnk1a1Q8BK63 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Csnk1a1Q8BK63 Gm3375-201ENSMUST00000203929 796 ntBASIC15.1■□□□□ 0.01
Csnk1a1Q8BK63 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Csnk1a1Q8BK63 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Csnk1a1Q8BK63 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Csnk1a1Q8BK63 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Csnk1a1Q8BK63 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Csnk1a1Q8BK63 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
Csnk1a1Q8BK63 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Csnk1a1Q8BK63 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC15.1■□□□□ 0.01
Csnk1a1Q8BK63 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC15.1■□□□□ 0.01
Csnk1a1Q8BK63 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Csnk1a1Q8BK63 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Csnk1a1Q8BK63 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC15.09■□□□□ 0.01
Csnk1a1Q8BK63 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Csnk1a1Q8BK63 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Csnk1a1Q8BK63 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC15.09■□□□□ 0.01
Csnk1a1Q8BK63 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC15.09■□□□□ 0.01
Csnk1a1Q8BK63 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 40.3 ms