Protein–RNA interactions for Protein: Q8BGJ9

U2af1l4, Splicing factor U2AF 26 kDa subunit, mousemouse

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
U2af1l4Q8BGJ9 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
U2af1l4Q8BGJ9 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
U2af1l4Q8BGJ9 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC20.06■□□□□ 0.8
U2af1l4Q8BGJ9 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
U2af1l4Q8BGJ9 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
U2af1l4Q8BGJ9 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
U2af1l4Q8BGJ9 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
U2af1l4Q8BGJ9 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
U2af1l4Q8BGJ9 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
U2af1l4Q8BGJ9 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
U2af1l4Q8BGJ9 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
U2af1l4Q8BGJ9 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC20.05■□□□□ 0.8
U2af1l4Q8BGJ9 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
U2af1l4Q8BGJ9 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
U2af1l4Q8BGJ9 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
U2af1l4Q8BGJ9 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
U2af1l4Q8BGJ9 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
U2af1l4Q8BGJ9 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
U2af1l4Q8BGJ9 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC20.05■□□□□ 0.8
U2af1l4Q8BGJ9 AC154471.1-201ENSMUST00000224418 436 ntBASIC20.05■□□□□ 0.8
U2af1l4Q8BGJ9 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
U2af1l4Q8BGJ9 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
U2af1l4Q8BGJ9 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
U2af1l4Q8BGJ9 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC20.05■□□□□ 0.8
U2af1l4Q8BGJ9 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
U2af1l4Q8BGJ9 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
U2af1l4Q8BGJ9 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
U2af1l4Q8BGJ9 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
U2af1l4Q8BGJ9 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
U2af1l4Q8BGJ9 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
U2af1l4Q8BGJ9 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
U2af1l4Q8BGJ9 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
U2af1l4Q8BGJ9 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
U2af1l4Q8BGJ9 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
U2af1l4Q8BGJ9 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
U2af1l4Q8BGJ9 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
U2af1l4Q8BGJ9 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
U2af1l4Q8BGJ9 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
U2af1l4Q8BGJ9 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
U2af1l4Q8BGJ9 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
U2af1l4Q8BGJ9 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
U2af1l4Q8BGJ9 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
U2af1l4Q8BGJ9 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
U2af1l4Q8BGJ9 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
U2af1l4Q8BGJ9 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
U2af1l4Q8BGJ9 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
U2af1l4Q8BGJ9 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC20.04■□□□□ 0.8
U2af1l4Q8BGJ9 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
U2af1l4Q8BGJ9 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
U2af1l4Q8BGJ9 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC20.03■□□□□ 0.8
U2af1l4Q8BGJ9 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
U2af1l4Q8BGJ9 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
U2af1l4Q8BGJ9 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
U2af1l4Q8BGJ9 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
U2af1l4Q8BGJ9 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
U2af1l4Q8BGJ9 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC20.03■□□□□ 0.8
U2af1l4Q8BGJ9 Gm25016-201ENSMUST00000158399 131 ntBASIC20.03■□□□□ 0.8
U2af1l4Q8BGJ9 Gm17661-201ENSMUST00000170317 270 ntBASIC20.03■□□□□ 0.8
U2af1l4Q8BGJ9 Gm22697-201ENSMUST00000175194 63 ntBASIC20.03■□□□□ 0.8
U2af1l4Q8BGJ9 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC20.03■□□□□ 0.8
U2af1l4Q8BGJ9 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC20.03■□□□□ 0.8
U2af1l4Q8BGJ9 AC134329.2-201ENSMUST00000217897 428 ntBASIC20.03■□□□□ 0.8
U2af1l4Q8BGJ9 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
U2af1l4Q8BGJ9 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
U2af1l4Q8BGJ9 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC20.03■□□□□ 0.8
U2af1l4Q8BGJ9 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
U2af1l4Q8BGJ9 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
U2af1l4Q8BGJ9 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
U2af1l4Q8BGJ9 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
U2af1l4Q8BGJ9 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
U2af1l4Q8BGJ9 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC20.02■□□□□ 0.8
U2af1l4Q8BGJ9 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC20.02■□□□□ 0.8
U2af1l4Q8BGJ9 Gm2274-201ENSMUST00000184539 609 ntBASIC20.02■□□□□ 0.8
U2af1l4Q8BGJ9 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
U2af1l4Q8BGJ9 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
U2af1l4Q8BGJ9 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC20.02■□□□□ 0.8
U2af1l4Q8BGJ9 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
U2af1l4Q8BGJ9 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
U2af1l4Q8BGJ9 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC20.02■□□□□ 0.79
U2af1l4Q8BGJ9 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
U2af1l4Q8BGJ9 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
U2af1l4Q8BGJ9 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
U2af1l4Q8BGJ9 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
U2af1l4Q8BGJ9 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC20.01■□□□□ 0.79
U2af1l4Q8BGJ9 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
U2af1l4Q8BGJ9 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
U2af1l4Q8BGJ9 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
U2af1l4Q8BGJ9 Faap20-210ENSMUST00000178473 1076 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
U2af1l4Q8BGJ9 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
U2af1l4Q8BGJ9 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
U2af1l4Q8BGJ9 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
U2af1l4Q8BGJ9 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
U2af1l4Q8BGJ9 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC20.01■□□□□ 0.79
U2af1l4Q8BGJ9 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
U2af1l4Q8BGJ9 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
U2af1l4Q8BGJ9 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
U2af1l4Q8BGJ9 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
U2af1l4Q8BGJ9 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
U2af1l4Q8BGJ9 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC20■□□□□ 0.79
U2af1l4Q8BGJ9 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 23.4 ms