Protein–RNA interactions for Protein: Q8BG99

Pknox2, Homeobox protein PKNOX2, mousemouse

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pknox2Q8BG99 Tbrg4-201ENSMUST00000000394 2290 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Pknox2Q8BG99 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Pknox2Q8BG99 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Pknox2Q8BG99 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
Pknox2Q8BG99 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Pknox2Q8BG99 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Pknox2Q8BG99 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Pknox2Q8BG99 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Pknox2Q8BG99 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Pknox2Q8BG99 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Pknox2Q8BG99 Lgals8-202ENSMUST00000099821 2792 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Pknox2Q8BG99 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Pknox2Q8BG99 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Pknox2Q8BG99 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Pknox2Q8BG99 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC19.25■□□□□ 0.67
Pknox2Q8BG99 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC19.25■□□□□ 0.67
Pknox2Q8BG99 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC19.25■□□□□ 0.67
Pknox2Q8BG99 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Pknox2Q8BG99 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC19.25■□□□□ 0.67
Pknox2Q8BG99 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Pknox2Q8BG99 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Pknox2Q8BG99 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Pknox2Q8BG99 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
Pknox2Q8BG99 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC19.25■□□□□ 0.67
Pknox2Q8BG99 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Pknox2Q8BG99 Gm45003-201ENSMUST00000205875 2158 ntBASIC19.25■□□□□ 0.67
Pknox2Q8BG99 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Pknox2Q8BG99 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Pknox2Q8BG99 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Pknox2Q8BG99 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Pknox2Q8BG99 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
Pknox2Q8BG99 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Pknox2Q8BG99 Otop2-201ENSMUST00000055490 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Pknox2Q8BG99 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC19.24■□□□□ 0.67
Pknox2Q8BG99 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Pknox2Q8BG99 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Pknox2Q8BG99 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Pknox2Q8BG99 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Pknox2Q8BG99 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Pknox2Q8BG99 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Pknox2Q8BG99 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
Pknox2Q8BG99 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Pknox2Q8BG99 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC19.24■□□□□ 0.67
Pknox2Q8BG99 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC19.24■□□□□ 0.67
Pknox2Q8BG99 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC19.24■□□□□ 0.67
Pknox2Q8BG99 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
Pknox2Q8BG99 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Pknox2Q8BG99 Zbtb45-202ENSMUST00000172240 2722 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Pknox2Q8BG99 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Pknox2Q8BG99 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
Pknox2Q8BG99 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
Pknox2Q8BG99 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
Pknox2Q8BG99 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Pknox2Q8BG99 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Pknox2Q8BG99 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Pknox2Q8BG99 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Pknox2Q8BG99 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Pknox2Q8BG99 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Pknox2Q8BG99 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Pknox2Q8BG99 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
Pknox2Q8BG99 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Pknox2Q8BG99 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Pknox2Q8BG99 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Pknox2Q8BG99 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC19.23■□□□□ 0.67
Pknox2Q8BG99 Gm18755-201ENSMUST00000218030 1099 ntBASIC19.23■□□□□ 0.67
Pknox2Q8BG99 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Pknox2Q8BG99 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Pknox2Q8BG99 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Pknox2Q8BG99 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Pknox2Q8BG99 AC093043.3-201ENSMUST00000226531 2273 ntBASIC19.23■□□□□ 0.67
Pknox2Q8BG99 BC003965-201ENSMUST00000088307 3022 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
Pknox2Q8BG99 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Pknox2Q8BG99 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
Pknox2Q8BG99 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Pknox2Q8BG99 Pcdhgb8-202ENSMUST00000208907 2796 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Pknox2Q8BG99 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Pknox2Q8BG99 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Pknox2Q8BG99 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Pknox2Q8BG99 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC19.22■□□□□ 0.67
Pknox2Q8BG99 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC19.22■□□□□ 0.67
Pknox2Q8BG99 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC19.22■□□□□ 0.67
Pknox2Q8BG99 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Pknox2Q8BG99 Gm17315-201ENSMUST00000181408 2504 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Pknox2Q8BG99 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Pknox2Q8BG99 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Pknox2Q8BG99 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Pknox2Q8BG99 Zfp740-201ENSMUST00000118729 4241 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Pknox2Q8BG99 Rusc1-201ENSMUST00000052539 3316 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Pknox2Q8BG99 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Pknox2Q8BG99 Nfatc2ip-201ENSMUST00000075671 3388 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Pknox2Q8BG99 B930092H01Rik-201ENSMUST00000213377 2678 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Pknox2Q8BG99 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Pknox2Q8BG99 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
Pknox2Q8BG99 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Pknox2Q8BG99 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
Pknox2Q8BG99 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Pknox2Q8BG99 Gm9194-201ENSMUST00000220749 1447 ntBASIC19.21■□□□□ 0.67
Pknox2Q8BG99 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Pknox2Q8BG99 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Pknox2Q8BG99 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 43.1 ms