Protein–RNA interactions for Protein: Q80ZI1

Trnp1, TMF-regulated nuclear protein 1, mousemouse

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trnp1Q80ZI1 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Trnp1Q80ZI1 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Trnp1Q80ZI1 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Trnp1Q80ZI1 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Trnp1Q80ZI1 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Trnp1Q80ZI1 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC19.18■□□□□ 0.66
Trnp1Q80ZI1 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
Trnp1Q80ZI1 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Trnp1Q80ZI1 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC19.18■□□□□ 0.66
Trnp1Q80ZI1 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC19.18■□□□□ 0.66
Trnp1Q80ZI1 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC19.18■□□□□ 0.66
Trnp1Q80ZI1 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Trnp1Q80ZI1 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Trnp1Q80ZI1 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Trnp1Q80ZI1 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
Trnp1Q80ZI1 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
Trnp1Q80ZI1 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
Trnp1Q80ZI1 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Trnp1Q80ZI1 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Trnp1Q80ZI1 Dmtn-210ENSMUST00000228824 2377 ntBASIC19.17■□□□□ 0.66
Trnp1Q80ZI1 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Trnp1Q80ZI1 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC19.17■□□□□ 0.66
Trnp1Q80ZI1 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC19.17■□□□□ 0.66
Trnp1Q80ZI1 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC19.17■□□□□ 0.66
Trnp1Q80ZI1 AC159093.1-201ENSMUST00000227779 380 ntBASIC19.17■□□□□ 0.66
Trnp1Q80ZI1 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Trnp1Q80ZI1 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Trnp1Q80ZI1 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Trnp1Q80ZI1 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Trnp1Q80ZI1 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
Trnp1Q80ZI1 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Trnp1Q80ZI1 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Trnp1Q80ZI1 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
Trnp1Q80ZI1 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
Trnp1Q80ZI1 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Trnp1Q80ZI1 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC19.16■□□□□ 0.66
Trnp1Q80ZI1 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Trnp1Q80ZI1 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Trnp1Q80ZI1 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC19.16■□□□□ 0.66
Trnp1Q80ZI1 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Trnp1Q80ZI1 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
Trnp1Q80ZI1 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Trnp1Q80ZI1 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
Trnp1Q80ZI1 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Trnp1Q80ZI1 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Trnp1Q80ZI1 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Trnp1Q80ZI1 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Trnp1Q80ZI1 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Trnp1Q80ZI1 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Trnp1Q80ZI1 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Trnp1Q80ZI1 Gm32996-201ENSMUST00000199828 1447 ntBASIC19.16■□□□□ 0.66
Trnp1Q80ZI1 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Trnp1Q80ZI1 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Trnp1Q80ZI1 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Trnp1Q80ZI1 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC19.15■□□□□ 0.66
Trnp1Q80ZI1 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
Trnp1Q80ZI1 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Trnp1Q80ZI1 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC19.15■□□□□ 0.66
Trnp1Q80ZI1 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Trnp1Q80ZI1 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
Trnp1Q80ZI1 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Trnp1Q80ZI1 Gm44430-201ENSMUST00000203376 995 ntBASIC19.15■□□□□ 0.66
Trnp1Q80ZI1 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC19.15■□□□□ 0.66
Trnp1Q80ZI1 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
Trnp1Q80ZI1 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Trnp1Q80ZI1 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
Trnp1Q80ZI1 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Trnp1Q80ZI1 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Trnp1Q80ZI1 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Trnp1Q80ZI1 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Trnp1Q80ZI1 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Trnp1Q80ZI1 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
Trnp1Q80ZI1 Zfp264-201ENSMUST00000208656 1563 ntBASIC19.15■□□□□ 0.66
Trnp1Q80ZI1 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Trnp1Q80ZI1 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC19.14■□□□□ 0.65
Trnp1Q80ZI1 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Trnp1Q80ZI1 Gm15467-201ENSMUST00000120582 445 ntBASIC19.14■□□□□ 0.65
Trnp1Q80ZI1 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC19.14■□□□□ 0.65
Trnp1Q80ZI1 Gm27702-201ENSMUST00000184512 56 ntBASIC19.14■□□□□ 0.65
Trnp1Q80ZI1 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Trnp1Q80ZI1 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC19.14■□□□□ 0.65
Trnp1Q80ZI1 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Trnp1Q80ZI1 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Trnp1Q80ZI1 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
Trnp1Q80ZI1 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
Trnp1Q80ZI1 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Trnp1Q80ZI1 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Trnp1Q80ZI1 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Trnp1Q80ZI1 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
Trnp1Q80ZI1 AC154527.4-201ENSMUST00000224364 1667 ntBASIC19.14■□□□□ 0.65
Trnp1Q80ZI1 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Trnp1Q80ZI1 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Trnp1Q80ZI1 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Trnp1Q80ZI1 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Trnp1Q80ZI1 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Trnp1Q80ZI1 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Trnp1Q80ZI1 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Trnp1Q80ZI1 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC19.13■□□□□ 0.65
Trnp1Q80ZI1 Psmb5-202ENSMUST00000227257 622 ntBASIC19.13■□□□□ 0.65
Trnp1Q80ZI1 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 23.7 ms