Protein–RNA interactions for Protein: Q80XC3

Usp6nl, USP6 N-terminal-like protein, mousemouse

Predictions only

Length 819 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp6nlQ80XC3 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Usp6nlQ80XC3 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
Usp6nlQ80XC3 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Usp6nlQ80XC3 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Usp6nlQ80XC3 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC18.75■□□□□ 0.59
Usp6nlQ80XC3 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC18.75■□□□□ 0.59
Usp6nlQ80XC3 Gm28659-201ENSMUST00000188013 759 ntBASIC18.75■□□□□ 0.59
Usp6nlQ80XC3 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC18.75■□□□□ 0.59
Usp6nlQ80XC3 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC18.75■□□□□ 0.59
Usp6nlQ80XC3 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Usp6nlQ80XC3 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC18.75■□□□□ 0.59
Usp6nlQ80XC3 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Usp6nlQ80XC3 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
Usp6nlQ80XC3 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Usp6nlQ80XC3 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC18.75■□□□□ 0.59
Usp6nlQ80XC3 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Usp6nlQ80XC3 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Usp6nlQ80XC3 Phf7-203ENSMUST00000226565 1971 ntBASIC18.75■□□□□ 0.59
Usp6nlQ80XC3 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Usp6nlQ80XC3 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
Usp6nlQ80XC3 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
Usp6nlQ80XC3 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Usp6nlQ80XC3 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Usp6nlQ80XC3 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Usp6nlQ80XC3 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Usp6nlQ80XC3 AC153889.1-201ENSMUST00000219257 330 ntBASIC18.74■□□□□ 0.59
Usp6nlQ80XC3 AC125350.1-201ENSMUST00000225115 903 ntBASIC18.74■□□□□ 0.59
Usp6nlQ80XC3 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
Usp6nlQ80XC3 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Usp6nlQ80XC3 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC18.74■□□□□ 0.59
Usp6nlQ80XC3 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Usp6nlQ80XC3 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Usp6nlQ80XC3 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Usp6nlQ80XC3 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Usp6nlQ80XC3 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Usp6nlQ80XC3 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
Usp6nlQ80XC3 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Usp6nlQ80XC3 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Usp6nlQ80XC3 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC18.73■□□□□ 0.59
Usp6nlQ80XC3 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Usp6nlQ80XC3 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Usp6nlQ80XC3 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Usp6nlQ80XC3 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Usp6nlQ80XC3 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Usp6nlQ80XC3 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Usp6nlQ80XC3 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Usp6nlQ80XC3 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
Usp6nlQ80XC3 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Usp6nlQ80XC3 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Usp6nlQ80XC3 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Usp6nlQ80XC3 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Usp6nlQ80XC3 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Usp6nlQ80XC3 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Usp6nlQ80XC3 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Usp6nlQ80XC3 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
Usp6nlQ80XC3 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Usp6nlQ80XC3 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Usp6nlQ80XC3 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Usp6nlQ80XC3 Grk6-206ENSMUST00000224995 2971 ntBASIC18.72■□□□□ 0.59
Usp6nlQ80XC3 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
Usp6nlQ80XC3 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Usp6nlQ80XC3 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Usp6nlQ80XC3 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Usp6nlQ80XC3 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Usp6nlQ80XC3 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Usp6nlQ80XC3 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Usp6nlQ80XC3 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Usp6nlQ80XC3 Gm5864-201ENSMUST00000202263 970 ntBASIC18.72■□□□□ 0.59
Usp6nlQ80XC3 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
Usp6nlQ80XC3 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Usp6nlQ80XC3 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC18.72■□□□□ 0.59
Usp6nlQ80XC3 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Usp6nlQ80XC3 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Usp6nlQ80XC3 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Usp6nlQ80XC3 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Usp6nlQ80XC3 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
Usp6nlQ80XC3 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Usp6nlQ80XC3 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC18.72■□□□□ 0.59
Usp6nlQ80XC3 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC18.72■□□□□ 0.59
Usp6nlQ80XC3 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Usp6nlQ80XC3 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Usp6nlQ80XC3 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Usp6nlQ80XC3 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Usp6nlQ80XC3 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Usp6nlQ80XC3 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Usp6nlQ80XC3 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Usp6nlQ80XC3 AC125311.2-201ENSMUST00000227477 1940 ntBASIC18.71■□□□□ 0.59
Usp6nlQ80XC3 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC18.71■□□□□ 0.59
Usp6nlQ80XC3 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC18.71■□□□□ 0.59
Usp6nlQ80XC3 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC18.71■□□□□ 0.59
Usp6nlQ80XC3 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
Usp6nlQ80XC3 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Usp6nlQ80XC3 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
Usp6nlQ80XC3 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Usp6nlQ80XC3 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Usp6nlQ80XC3 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Usp6nlQ80XC3 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
Usp6nlQ80XC3 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Usp6nlQ80XC3 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC18.71■□□□□ 0.59
Usp6nlQ80XC3 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 93.2 ms