Protein–RNA interactions for Protein: Q80WG7

Trim36, E3 ubiquitin-protein ligase Trim36, mousemouse

Predictions only

Length 729 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim36Q80WG7 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Trim36Q80WG7 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trim36Q80WG7 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC16.44■□□□□ 0.22
Trim36Q80WG7 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trim36Q80WG7 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Trim36Q80WG7 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC16.44■□□□□ 0.22
Trim36Q80WG7 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trim36Q80WG7 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trim36Q80WG7 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
Trim36Q80WG7 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trim36Q80WG7 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trim36Q80WG7 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trim36Q80WG7 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trim36Q80WG7 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trim36Q80WG7 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Trim36Q80WG7 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Trim36Q80WG7 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trim36Q80WG7 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC16.43■□□□□ 0.22
Trim36Q80WG7 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trim36Q80WG7 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trim36Q80WG7 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC16.43■□□□□ 0.22
Trim36Q80WG7 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Trim36Q80WG7 H2-K2-201ENSMUST00000174250 1049 ntBASIC16.43■□□□□ 0.22
Trim36Q80WG7 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC16.43■□□□□ 0.22
Trim36Q80WG7 Gm29241-201ENSMUST00000189260 1096 ntBASIC16.43■□□□□ 0.22
Trim36Q80WG7 AC153881.1-201ENSMUST00000214448 284 ntBASIC16.43■□□□□ 0.22
Trim36Q80WG7 AC154649.1-201ENSMUST00000227392 384 ntBASIC16.43■□□□□ 0.22
Trim36Q80WG7 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trim36Q80WG7 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Trim36Q80WG7 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trim36Q80WG7 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC16.43■□□□□ 0.22
Trim36Q80WG7 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Trim36Q80WG7 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC16.43■□□□□ 0.22
Trim36Q80WG7 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Trim36Q80WG7 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trim36Q80WG7 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trim36Q80WG7 Haglr-201ENSMUST00000100000 2085 ntBASIC16.42■□□□□ 0.22
Trim36Q80WG7 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trim36Q80WG7 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trim36Q80WG7 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
Trim36Q80WG7 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trim36Q80WG7 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trim36Q80WG7 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Trim36Q80WG7 Gm10418-201ENSMUST00000100943 576 ntBASIC16.42■□□□□ 0.22
Trim36Q80WG7 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trim36Q80WG7 Gm6576-201ENSMUST00000169678 883 ntBASIC16.42■□□□□ 0.22
Trim36Q80WG7 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC16.42■□□□□ 0.22
Trim36Q80WG7 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC16.42■□□□□ 0.22
Trim36Q80WG7 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trim36Q80WG7 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trim36Q80WG7 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
Trim36Q80WG7 Gm16401-202ENSMUST00000197463 2074 ntBASIC16.42■□□□□ 0.22
Trim36Q80WG7 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trim36Q80WG7 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC16.42■□□□□ 0.22
Trim36Q80WG7 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Trim36Q80WG7 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
Trim36Q80WG7 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trim36Q80WG7 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC16.42■□□□□ 0.22
Trim36Q80WG7 Flg-201ENSMUST00000050758 1488 ntBASIC16.42■□□□□ 0.22
Trim36Q80WG7 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trim36Q80WG7 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Trim36Q80WG7 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trim36Q80WG7 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Trim36Q80WG7 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trim36Q80WG7 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trim36Q80WG7 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trim36Q80WG7 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Trim36Q80WG7 Gm15378-201ENSMUST00000121894 207 ntBASIC16.41■□□□□ 0.22
Trim36Q80WG7 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC16.41■□□□□ 0.22
Trim36Q80WG7 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trim36Q80WG7 Mtag2-201ENSMUST00000058665 714 ntBASIC16.41■□□□□ 0.22
Trim36Q80WG7 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
Trim36Q80WG7 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trim36Q80WG7 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC16.41■□□□□ 0.22
Trim36Q80WG7 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trim36Q80WG7 Foxo1-201ENSMUST00000053764 8665 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trim36Q80WG7 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC16.4■□□□□ 0.22
Trim36Q80WG7 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
Trim36Q80WG7 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trim36Q80WG7 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Trim36Q80WG7 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Trim36Q80WG7 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trim36Q80WG7 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trim36Q80WG7 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trim36Q80WG7 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trim36Q80WG7 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trim36Q80WG7 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trim36Q80WG7 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Trim36Q80WG7 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trim36Q80WG7 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC16.4■□□□□ 0.22
Trim36Q80WG7 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trim36Q80WG7 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC16.4■□□□□ 0.22
Trim36Q80WG7 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Trim36Q80WG7 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC16.4■□□□□ 0.22
Trim36Q80WG7 AL672049.1-201ENSMUST00000197943 91 ntBASIC16.4■□□□□ 0.22
Trim36Q80WG7 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Trim36Q80WG7 Gm29791-202ENSMUST00000207888 369 ntBASIC16.4■□□□□ 0.22
Trim36Q80WG7 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
Trim36Q80WG7 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trim36Q80WG7 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 51.9 ms