Protein–RNA interactions for Protein: Q80U87

Usp8, Ubiquitin carboxyl-terminal hydrolase 8, mousemouse

Predictions only

Length 1,080 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp8Q80U87 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Usp8Q80U87 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Usp8Q80U87 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Usp8Q80U87 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Usp8Q80U87 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Usp8Q80U87 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Usp8Q80U87 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC17.07■□□□□ 0.32
Usp8Q80U87 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Usp8Q80U87 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Usp8Q80U87 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Usp8Q80U87 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Usp8Q80U87 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Usp8Q80U87 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Usp8Q80U87 Magi1-201ENSMUST00000055224 7007 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Usp8Q80U87 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC17.07■□□□□ 0.32
Usp8Q80U87 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Usp8Q80U87 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Usp8Q80U87 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Usp8Q80U87 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Usp8Q80U87 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Usp8Q80U87 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Usp8Q80U87 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Usp8Q80U87 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Usp8Q80U87 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Usp8Q80U87 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Usp8Q80U87 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Usp8Q80U87 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Usp8Q80U87 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Usp8Q80U87 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Usp8Q80U87 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC17.06■□□□□ 0.32
Usp8Q80U87 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Usp8Q80U87 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Usp8Q80U87 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
Usp8Q80U87 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Usp8Q80U87 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Usp8Q80U87 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC17.06■□□□□ 0.32
Usp8Q80U87 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Usp8Q80U87 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
Usp8Q80U87 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Usp8Q80U87 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Usp8Q80U87 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC17.06■□□□□ 0.32
Usp8Q80U87 AC125311.2-201ENSMUST00000227477 1940 ntBASIC17.06■□□□□ 0.32
Usp8Q80U87 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
Usp8Q80U87 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Usp8Q80U87 Dancr-204ENSMUST00000132389 2347 ntBASIC17.05■□□□□ 0.32
Usp8Q80U87 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
Usp8Q80U87 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Usp8Q80U87 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Usp8Q80U87 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Usp8Q80U87 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Usp8Q80U87 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Usp8Q80U87 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Usp8Q80U87 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Usp8Q80U87 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Usp8Q80U87 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Usp8Q80U87 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Usp8Q80U87 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Usp8Q80U87 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Usp8Q80U87 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Usp8Q80U87 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC17.05■□□□□ 0.32
Usp8Q80U87 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC17.05■□□□□ 0.32
Usp8Q80U87 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Usp8Q80U87 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Usp8Q80U87 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Usp8Q80U87 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Usp8Q80U87 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Usp8Q80U87 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Usp8Q80U87 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC17.05■□□□□ 0.32
Usp8Q80U87 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Usp8Q80U87 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Usp8Q80U87 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Usp8Q80U87 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC17.04■□□□□ 0.32
Usp8Q80U87 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC17.04■□□□□ 0.32
Usp8Q80U87 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC17.04■□□□□ 0.32
Usp8Q80U87 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Usp8Q80U87 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Usp8Q80U87 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Usp8Q80U87 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Usp8Q80U87 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Usp8Q80U87 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC17.04■□□□□ 0.32
Usp8Q80U87 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC17.04■□□□□ 0.32
Usp8Q80U87 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC17.04■□□□□ 0.32
Usp8Q80U87 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Usp8Q80U87 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Usp8Q80U87 Gm20628-201ENSMUST00000177363 3215 ntBASIC17.04■□□□□ 0.32
Usp8Q80U87 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Usp8Q80U87 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Usp8Q80U87 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Usp8Q80U87 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Usp8Q80U87 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Usp8Q80U87 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Usp8Q80U87 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Usp8Q80U87 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Usp8Q80U87 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Usp8Q80U87 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
Usp8Q80U87 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
Usp8Q80U87 Haglr-201ENSMUST00000100000 2085 ntBASIC17.03■□□□□ 0.32
Usp8Q80U87 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Usp8Q80U87 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Usp8Q80U87 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 38.4 ms