Protein–RNA interactions for Protein: Q80T11

Ush1g, Usher syndrome type-1G protein homolog, mousemouse

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ush1gQ80T11 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
Ush1gQ80T11 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Ush1gQ80T11 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Ush1gQ80T11 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Ush1gQ80T11 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
Ush1gQ80T11 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Ush1gQ80T11 Gm26039-201ENSMUST00000158152 144 ntBASIC18.59■□□□□ 0.57
Ush1gQ80T11 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC18.59■□□□□ 0.57
Ush1gQ80T11 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC18.59■□□□□ 0.57
Ush1gQ80T11 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Ush1gQ80T11 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
Ush1gQ80T11 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
Ush1gQ80T11 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC18.59■□□□□ 0.57
Ush1gQ80T11 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Ush1gQ80T11 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
Ush1gQ80T11 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Ush1gQ80T11 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
Ush1gQ80T11 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC18.58■□□□□ 0.57
Ush1gQ80T11 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.57
Ush1gQ80T11 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Ush1gQ80T11 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.57
Ush1gQ80T11 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Ush1gQ80T11 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Ush1gQ80T11 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Ush1gQ80T11 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Ush1gQ80T11 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Ush1gQ80T11 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
Ush1gQ80T11 Mir3081-201ENSMUST00000175305 84 ntBASIC18.58■□□□□ 0.56
Ush1gQ80T11 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
Ush1gQ80T11 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Ush1gQ80T11 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Ush1gQ80T11 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
Ush1gQ80T11 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Ush1gQ80T11 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
Ush1gQ80T11 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Ush1gQ80T11 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Ush1gQ80T11 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Ush1gQ80T11 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Ush1gQ80T11 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Ush1gQ80T11 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Ush1gQ80T11 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Ush1gQ80T11 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Ush1gQ80T11 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
Ush1gQ80T11 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
Ush1gQ80T11 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Ush1gQ80T11 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Ush1gQ80T11 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC18.57■□□□□ 0.56
Ush1gQ80T11 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Ush1gQ80T11 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC18.57■□□□□ 0.56
Ush1gQ80T11 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Ush1gQ80T11 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Ush1gQ80T11 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Ush1gQ80T11 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Ush1gQ80T11 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Ush1gQ80T11 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC18.56■□□□□ 0.56
Ush1gQ80T11 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Ush1gQ80T11 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
Ush1gQ80T11 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC18.56■□□□□ 0.56
Ush1gQ80T11 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
Ush1gQ80T11 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Ush1gQ80T11 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC18.56■□□□□ 0.56
Ush1gQ80T11 Gm27357-201ENSMUST00000183754 135 ntBASIC18.56■□□□□ 0.56
Ush1gQ80T11 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC18.56■□□□□ 0.56
Ush1gQ80T11 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC18.56■□□□□ 0.56
Ush1gQ80T11 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Ush1gQ80T11 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC18.56■□□□□ 0.56
Ush1gQ80T11 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
Ush1gQ80T11 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Ush1gQ80T11 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Ush1gQ80T11 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
Ush1gQ80T11 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Ush1gQ80T11 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC18.55■□□□□ 0.56
Ush1gQ80T11 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC18.55■□□□□ 0.56
Ush1gQ80T11 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Ush1gQ80T11 Gm8969-201ENSMUST00000199694 526 ntBASIC18.55■□□□□ 0.56
Ush1gQ80T11 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Ush1gQ80T11 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
Ush1gQ80T11 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Ush1gQ80T11 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Ush1gQ80T11 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
Ush1gQ80T11 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
Ush1gQ80T11 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
Ush1gQ80T11 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Ush1gQ80T11 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Ush1gQ80T11 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Ush1gQ80T11 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC18.54■□□□□ 0.56
Ush1gQ80T11 Gm6623-201ENSMUST00000173570 544 ntBASIC18.54■□□□□ 0.56
Ush1gQ80T11 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC18.54■□□□□ 0.56
Ush1gQ80T11 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Ush1gQ80T11 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Ush1gQ80T11 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
Ush1gQ80T11 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
Ush1gQ80T11 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Ush1gQ80T11 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Ush1gQ80T11 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
Ush1gQ80T11 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC18.54■□□□□ 0.56
Ush1gQ80T11 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Ush1gQ80T11 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Ush1gQ80T11 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC18.54■□□□□ 0.56
Ush1gQ80T11 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 31.7 ms