Protein–RNA interactions for Protein: Q80SY5

Prpf38b, Pre-mRNA-splicing factor 38B, mousemouse

Known RBP Predictions only

Length 542 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf38bQ80SY5 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Prpf38bQ80SY5 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Prpf38bQ80SY5 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Prpf38bQ80SY5 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Prpf38bQ80SY5 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
Prpf38bQ80SY5 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Prpf38bQ80SY5 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Prpf38bQ80SY5 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Prpf38bQ80SY5 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
Prpf38bQ80SY5 Gm38345-201ENSMUST00000192635 1748 ntBASIC17.73■□□□□ 0.43
Prpf38bQ80SY5 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Prpf38bQ80SY5 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Prpf38bQ80SY5 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Prpf38bQ80SY5 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Prpf38bQ80SY5 Mir1668-201ENSMUST00000184114 107 ntBASIC17.73■□□□□ 0.43
Prpf38bQ80SY5 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Prpf38bQ80SY5 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Prpf38bQ80SY5 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Prpf38bQ80SY5 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC17.73■□□□□ 0.43
Prpf38bQ80SY5 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Prpf38bQ80SY5 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
Prpf38bQ80SY5 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Prpf38bQ80SY5 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC17.73■□□□□ 0.43
Prpf38bQ80SY5 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
Prpf38bQ80SY5 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
Prpf38bQ80SY5 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Prpf38bQ80SY5 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Prpf38bQ80SY5 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Prpf38bQ80SY5 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Prpf38bQ80SY5 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Prpf38bQ80SY5 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC17.72■□□□□ 0.43
Prpf38bQ80SY5 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Prpf38bQ80SY5 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Prpf38bQ80SY5 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
Prpf38bQ80SY5 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Prpf38bQ80SY5 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC17.72■□□□□ 0.43
Prpf38bQ80SY5 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Prpf38bQ80SY5 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Prpf38bQ80SY5 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Prpf38bQ80SY5 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Prpf38bQ80SY5 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
Prpf38bQ80SY5 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Prpf38bQ80SY5 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Prpf38bQ80SY5 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Prpf38bQ80SY5 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Prpf38bQ80SY5 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Prpf38bQ80SY5 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
Prpf38bQ80SY5 Gm28265-201ENSMUST00000188201 2319 ntBASIC17.71■□□□□ 0.43
Prpf38bQ80SY5 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Prpf38bQ80SY5 Gm42918-201ENSMUST00000199249 1580 ntBASIC17.71■□□□□ 0.43
Prpf38bQ80SY5 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC17.71■□□□□ 0.43
Prpf38bQ80SY5 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC17.71■□□□□ 0.43
Prpf38bQ80SY5 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Prpf38bQ80SY5 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC17.71■□□□□ 0.43
Prpf38bQ80SY5 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC17.71■□□□□ 0.43
Prpf38bQ80SY5 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC17.71■□□□□ 0.43
Prpf38bQ80SY5 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC17.71■□□□□ 0.43
Prpf38bQ80SY5 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Prpf38bQ80SY5 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC17.71■□□□□ 0.43
Prpf38bQ80SY5 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC17.71■□□□□ 0.43
Prpf38bQ80SY5 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Prpf38bQ80SY5 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC17.71■□□□□ 0.43
Prpf38bQ80SY5 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
Prpf38bQ80SY5 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Prpf38bQ80SY5 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC17.71■□□□□ 0.42
Prpf38bQ80SY5 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Prpf38bQ80SY5 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Prpf38bQ80SY5 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Prpf38bQ80SY5 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Prpf38bQ80SY5 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Prpf38bQ80SY5 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
Prpf38bQ80SY5 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Prpf38bQ80SY5 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Prpf38bQ80SY5 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Prpf38bQ80SY5 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC17.7■□□□□ 0.42
Prpf38bQ80SY5 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Prpf38bQ80SY5 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC17.7■□□□□ 0.42
Prpf38bQ80SY5 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Prpf38bQ80SY5 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Prpf38bQ80SY5 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Prpf38bQ80SY5 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC17.7■□□□□ 0.42
Prpf38bQ80SY5 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Prpf38bQ80SY5 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC17.7■□□□□ 0.42
Prpf38bQ80SY5 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC17.7■□□□□ 0.42
Prpf38bQ80SY5 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Prpf38bQ80SY5 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Prpf38bQ80SY5 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Prpf38bQ80SY5 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Prpf38bQ80SY5 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Prpf38bQ80SY5 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Prpf38bQ80SY5 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
Prpf38bQ80SY5 Tgds-204ENSMUST00000228543 1594 ntBASIC17.7■□□□□ 0.42
Prpf38bQ80SY5 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Prpf38bQ80SY5 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
Prpf38bQ80SY5 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Prpf38bQ80SY5 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Prpf38bQ80SY5 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Prpf38bQ80SY5 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Prpf38bQ80SY5 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
Prpf38bQ80SY5 AC132104.2-201ENSMUST00000215011 266 ntBASIC17.69■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 21 ms