Protein–RNA interactions for Protein: Q80SX8

Pif1, ATP-dependent DNA helicase PIF1, mousemouse

Predictions only

Length 650 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pif1Q80SX8 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Pif1Q80SX8 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Pif1Q80SX8 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Pif1Q80SX8 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Pif1Q80SX8 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Pif1Q80SX8 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Pif1Q80SX8 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
Pif1Q80SX8 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pif1Q80SX8 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pif1Q80SX8 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pif1Q80SX8 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
Pif1Q80SX8 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pif1Q80SX8 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pif1Q80SX8 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC15.67■□□□□ 0.1
Pif1Q80SX8 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Pif1Q80SX8 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Pif1Q80SX8 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pif1Q80SX8 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pif1Q80SX8 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Pif1Q80SX8 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pif1Q80SX8 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pif1Q80SX8 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pif1Q80SX8 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC15.67■□□□□ 0.1
Pif1Q80SX8 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pif1Q80SX8 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pif1Q80SX8 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pif1Q80SX8 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pif1Q80SX8 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pif1Q80SX8 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
Pif1Q80SX8 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pif1Q80SX8 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC15.67■□□□□ 0.1
Pif1Q80SX8 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Pif1Q80SX8 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Pif1Q80SX8 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pif1Q80SX8 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Pif1Q80SX8 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Pif1Q80SX8 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Pif1Q80SX8 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Pif1Q80SX8 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Pif1Q80SX8 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Pif1Q80SX8 Haglr-201ENSMUST00000100000 2085 ntBASIC15.66■□□□□ 0.1
Pif1Q80SX8 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Pif1Q80SX8 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
Pif1Q80SX8 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
Pif1Q80SX8 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Pif1Q80SX8 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Pif1Q80SX8 Gm18958-201ENSMUST00000174258 762 ntBASIC15.66■□□□□ 0.1
Pif1Q80SX8 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Pif1Q80SX8 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
Pif1Q80SX8 Gm7461-201ENSMUST00000058918 827 ntBASIC15.66■□□□□ 0.1
Pif1Q80SX8 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Pif1Q80SX8 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Pif1Q80SX8 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Pif1Q80SX8 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Pif1Q80SX8 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
Pif1Q80SX8 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Pif1Q80SX8 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC15.66■□□□□ 0.1
Pif1Q80SX8 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Pif1Q80SX8 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Pif1Q80SX8 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Pif1Q80SX8 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
Pif1Q80SX8 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC15.65■□□□□ 0.1
Pif1Q80SX8 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Pif1Q80SX8 Actl10-202ENSMUST00000226583 1501 ntBASIC15.65■□□□□ 0.1
Pif1Q80SX8 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Pif1Q80SX8 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
Pif1Q80SX8 Gm7153-201ENSMUST00000117092 455 ntBASIC15.65■□□□□ 0.1
Pif1Q80SX8 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Pif1Q80SX8 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
Pif1Q80SX8 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Pif1Q80SX8 Gm43702-201ENSMUST00000198772 2546 ntBASIC15.65■□□□□ 0.1
Pif1Q80SX8 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Pif1Q80SX8 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Pif1Q80SX8 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Pif1Q80SX8 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Pif1Q80SX8 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC15.64■□□□□ 0.09
Pif1Q80SX8 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Pif1Q80SX8 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Pif1Q80SX8 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Pif1Q80SX8 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Pif1Q80SX8 Mir770-201ENSMUST00000103252 94 ntBASIC15.64■□□□□ 0.09
Pif1Q80SX8 Mir3081-201ENSMUST00000175305 84 ntBASIC15.64■□□□□ 0.09
Pif1Q80SX8 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC15.64■□□□□ 0.09
Pif1Q80SX8 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Pif1Q80SX8 Gm37722-201ENSMUST00000193757 208 ntBASIC15.64■□□□□ 0.09
Pif1Q80SX8 Gm8969-201ENSMUST00000199694 526 ntBASIC15.64■□□□□ 0.09
Pif1Q80SX8 Otx2os1-206ENSMUST00000228153 787 ntBASIC15.64■□□□□ 0.09
Pif1Q80SX8 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Pif1Q80SX8 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
Pif1Q80SX8 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Pif1Q80SX8 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Pif1Q80SX8 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Pif1Q80SX8 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC15.64■□□□□ 0.09
Pif1Q80SX8 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Pif1Q80SX8 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC15.64■□□□□ 0.09
Pif1Q80SX8 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Pif1Q80SX8 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Pif1Q80SX8 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
Pif1Q80SX8 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Pif1Q80SX8 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 33 ms