Protein–RNA interactions for Protein: Q7TNK1

Rfx4, Transcription factor RFX4, mousemouse

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx4Q7TNK1 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Rfx4Q7TNK1 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Rfx4Q7TNK1 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Rfx4Q7TNK1 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Rfx4Q7TNK1 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Rfx4Q7TNK1 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
Rfx4Q7TNK1 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Rfx4Q7TNK1 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Rfx4Q7TNK1 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Rfx4Q7TNK1 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Rfx4Q7TNK1 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Rfx4Q7TNK1 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
Rfx4Q7TNK1 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
Rfx4Q7TNK1 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Rfx4Q7TNK1 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Rfx4Q7TNK1 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Rfx4Q7TNK1 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC16.35■□□□□ 0.21
Rfx4Q7TNK1 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Rfx4Q7TNK1 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
Rfx4Q7TNK1 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Rfx4Q7TNK1 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Rfx4Q7TNK1 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Rfx4Q7TNK1 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
Rfx4Q7TNK1 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Rfx4Q7TNK1 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC16.34■□□□□ 0.21
Rfx4Q7TNK1 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Rfx4Q7TNK1 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Rfx4Q7TNK1 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Rfx4Q7TNK1 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC16.34■□□□□ 0.21
Rfx4Q7TNK1 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC16.34■□□□□ 0.21
Rfx4Q7TNK1 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Rfx4Q7TNK1 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Rfx4Q7TNK1 Gm11643-201ENSMUST00000119578 864 ntBASIC16.34■□□□□ 0.21
Rfx4Q7TNK1 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
Rfx4Q7TNK1 Wnt10b-205ENSMUST00000226846 1204 ntBASIC16.34■□□□□ 0.21
Rfx4Q7TNK1 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Rfx4Q7TNK1 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Rfx4Q7TNK1 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC16.34■□□□□ 0.21
Rfx4Q7TNK1 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC16.34■□□□□ 0.21
Rfx4Q7TNK1 CT010478.1-201ENSMUST00000220747 2787 ntBASIC16.34■□□□□ 0.21
Rfx4Q7TNK1 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Rfx4Q7TNK1 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Rfx4Q7TNK1 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Rfx4Q7TNK1 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Rfx4Q7TNK1 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Rfx4Q7TNK1 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Rfx4Q7TNK1 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Rfx4Q7TNK1 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Rfx4Q7TNK1 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Rfx4Q7TNK1 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Rfx4Q7TNK1 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Rfx4Q7TNK1 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Rfx4Q7TNK1 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Rfx4Q7TNK1 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.21
Rfx4Q7TNK1 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Rfx4Q7TNK1 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.21
Rfx4Q7TNK1 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Rfx4Q7TNK1 Gm36858-201ENSMUST00000194501 2391 ntBASIC16.33■□□□□ 0.2
Rfx4Q7TNK1 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC16.33■□□□□ 0.2
Rfx4Q7TNK1 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC16.33■□□□□ 0.2
Rfx4Q7TNK1 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Rfx4Q7TNK1 Gm7514-201ENSMUST00000209475 934 ntBASIC16.33■□□□□ 0.2
Rfx4Q7TNK1 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Rfx4Q7TNK1 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Rfx4Q7TNK1 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Rfx4Q7TNK1 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Rfx4Q7TNK1 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC16.33■□□□□ 0.2
Rfx4Q7TNK1 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Rfx4Q7TNK1 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Rfx4Q7TNK1 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Rfx4Q7TNK1 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Rfx4Q7TNK1 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Rfx4Q7TNK1 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Rfx4Q7TNK1 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Rfx4Q7TNK1 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Rfx4Q7TNK1 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
Rfx4Q7TNK1 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
Rfx4Q7TNK1 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rfx4Q7TNK1 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rfx4Q7TNK1 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Rfx4Q7TNK1 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rfx4Q7TNK1 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rfx4Q7TNK1 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rfx4Q7TNK1 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rfx4Q7TNK1 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rfx4Q7TNK1 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC16.32■□□□□ 0.2
Rfx4Q7TNK1 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Rfx4Q7TNK1 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Rfx4Q7TNK1 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rfx4Q7TNK1 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rfx4Q7TNK1 Flg-201ENSMUST00000050758 1488 ntBASIC16.32■□□□□ 0.2
Rfx4Q7TNK1 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rfx4Q7TNK1 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rfx4Q7TNK1 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rfx4Q7TNK1 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rfx4Q7TNK1 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rfx4Q7TNK1 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rfx4Q7TNK1 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rfx4Q7TNK1 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rfx4Q7TNK1 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 11.4 ms