Protein–RNA interactions for Protein: Q6ZQH8

Nup188, Nucleoporin NUP188 homolog, mousemouse

Predictions only

Length 1,759 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup188Q6ZQH8 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Nup188Q6ZQH8 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
Nup188Q6ZQH8 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Nup188Q6ZQH8 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Nup188Q6ZQH8 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC20.18■□□□□ 0.82
Nup188Q6ZQH8 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Nup188Q6ZQH8 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Nup188Q6ZQH8 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Nup188Q6ZQH8 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC20.18■□□□□ 0.82
Nup188Q6ZQH8 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
Nup188Q6ZQH8 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC20.18■□□□□ 0.82
Nup188Q6ZQH8 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC20.18■□□□□ 0.82
Nup188Q6ZQH8 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC20.18■□□□□ 0.82
Nup188Q6ZQH8 Gm6296-201ENSMUST00000222599 943 ntBASIC20.18■□□□□ 0.82
Nup188Q6ZQH8 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Nup188Q6ZQH8 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Nup188Q6ZQH8 Pla2g10-201ENSMUST00000023364 1423 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Nup188Q6ZQH8 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Nup188Q6ZQH8 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Nup188Q6ZQH8 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Nup188Q6ZQH8 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC20.17■□□□□ 0.82
Nup188Q6ZQH8 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
Nup188Q6ZQH8 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC20.17■□□□□ 0.82
Nup188Q6ZQH8 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Nup188Q6ZQH8 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC20.17■□□□□ 0.82
Nup188Q6ZQH8 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
Nup188Q6ZQH8 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Nup188Q6ZQH8 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Nup188Q6ZQH8 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Nup188Q6ZQH8 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Nup188Q6ZQH8 Gm13312-201ENSMUST00000119631 718 ntBASIC20.16■□□□□ 0.82
Nup188Q6ZQH8 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Nup188Q6ZQH8 Gm43332-201ENSMUST00000202511 1044 ntBASIC20.16■□□□□ 0.82
Nup188Q6ZQH8 CT009713.7-201ENSMUST00000224689 571 ntBASIC20.16■□□□□ 0.82
Nup188Q6ZQH8 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Nup188Q6ZQH8 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
Nup188Q6ZQH8 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Nup188Q6ZQH8 Gfra2-202ENSMUST00000227633 1480 ntBASIC20.16■□□□□ 0.82
Nup188Q6ZQH8 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Nup188Q6ZQH8 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Nup188Q6ZQH8 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Nup188Q6ZQH8 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC20.16■□□□□ 0.82
Nup188Q6ZQH8 Gm12350-201ENSMUST00000121208 462 ntBASIC20.16■□□□□ 0.82
Nup188Q6ZQH8 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC20.16■□□□□ 0.82
Nup188Q6ZQH8 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Nup188Q6ZQH8 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC20.15■□□□□ 0.82
Nup188Q6ZQH8 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Nup188Q6ZQH8 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC20.15■□□□□ 0.82
Nup188Q6ZQH8 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC20.15■□□□□ 0.82
Nup188Q6ZQH8 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Nup188Q6ZQH8 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Nup188Q6ZQH8 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
Nup188Q6ZQH8 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC20.14■□□□□ 0.82
Nup188Q6ZQH8 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC20.14■□□□□ 0.82
Nup188Q6ZQH8 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
Nup188Q6ZQH8 Gm5364-201ENSMUST00000216789 889 ntBASIC20.14■□□□□ 0.81
Nup188Q6ZQH8 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Nup188Q6ZQH8 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
Nup188Q6ZQH8 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Nup188Q6ZQH8 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC20.14■□□□□ 0.81
Nup188Q6ZQH8 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC20.14■□□□□ 0.81
Nup188Q6ZQH8 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Nup188Q6ZQH8 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
Nup188Q6ZQH8 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
Nup188Q6ZQH8 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Nup188Q6ZQH8 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Nup188Q6ZQH8 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Nup188Q6ZQH8 Gm5953-201ENSMUST00000220644 2616 ntBASIC20.13■□□□□ 0.81
Nup188Q6ZQH8 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC20.13■□□□□ 0.81
Nup188Q6ZQH8 Gm6376-201ENSMUST00000209407 580 ntBASIC20.13■□□□□ 0.81
Nup188Q6ZQH8 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Nup188Q6ZQH8 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Nup188Q6ZQH8 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
Nup188Q6ZQH8 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Nup188Q6ZQH8 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Nup188Q6ZQH8 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
Nup188Q6ZQH8 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Nup188Q6ZQH8 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Nup188Q6ZQH8 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Nup188Q6ZQH8 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Nup188Q6ZQH8 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC20.13■□□□□ 0.81
Nup188Q6ZQH8 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC20.13■□□□□ 0.81
Nup188Q6ZQH8 Lgals3-203ENSMUST00000146468 1072 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Nup188Q6ZQH8 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC20.13■□□□□ 0.81
Nup188Q6ZQH8 Gm43575-201ENSMUST00000196420 516 ntBASIC20.13■□□□□ 0.81
Nup188Q6ZQH8 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Nup188Q6ZQH8 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Nup188Q6ZQH8 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
Nup188Q6ZQH8 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
Nup188Q6ZQH8 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Nup188Q6ZQH8 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Nup188Q6ZQH8 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Nup188Q6ZQH8 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC20.12■□□□□ 0.81
Nup188Q6ZQH8 AC159093.1-201ENSMUST00000227779 380 ntBASIC20.12■□□□□ 0.81
Nup188Q6ZQH8 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Nup188Q6ZQH8 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Nup188Q6ZQH8 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Nup188Q6ZQH8 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
Nup188Q6ZQH8 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
Nup188Q6ZQH8 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 18.5 ms