Protein–RNA interactions for Protein: Q6PDG5

Smarcc2, SWI/SNF complex subunit SMARCC2, mousemouse

Predictions only

Length 1,213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcc2Q6PDG5 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Smarcc2Q6PDG5 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
Smarcc2Q6PDG5 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC19.84■□□□□ 0.77
Smarcc2Q6PDG5 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Smarcc2Q6PDG5 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC19.84■□□□□ 0.77
Smarcc2Q6PDG5 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
Smarcc2Q6PDG5 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Smarcc2Q6PDG5 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Smarcc2Q6PDG5 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Smarcc2Q6PDG5 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Smarcc2Q6PDG5 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.77
Smarcc2Q6PDG5 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC19.83■□□□□ 0.77
Smarcc2Q6PDG5 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC19.83■□□□□ 0.77
Smarcc2Q6PDG5 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Smarcc2Q6PDG5 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Smarcc2Q6PDG5 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
Smarcc2Q6PDG5 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Smarcc2Q6PDG5 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Smarcc2Q6PDG5 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.76
Smarcc2Q6PDG5 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Smarcc2Q6PDG5 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Smarcc2Q6PDG5 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
Smarcc2Q6PDG5 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Smarcc2Q6PDG5 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Smarcc2Q6PDG5 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Smarcc2Q6PDG5 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
Smarcc2Q6PDG5 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC19.82■□□□□ 0.76
Smarcc2Q6PDG5 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Smarcc2Q6PDG5 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
Smarcc2Q6PDG5 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Smarcc2Q6PDG5 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Smarcc2Q6PDG5 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Smarcc2Q6PDG5 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC19.82■□□□□ 0.76
Smarcc2Q6PDG5 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Smarcc2Q6PDG5 AC158538.1-201ENSMUST00000225870 294 ntBASIC19.82■□□□□ 0.76
Smarcc2Q6PDG5 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Smarcc2Q6PDG5 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Smarcc2Q6PDG5 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Smarcc2Q6PDG5 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Smarcc2Q6PDG5 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC19.82■□□□□ 0.76
Smarcc2Q6PDG5 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Smarcc2Q6PDG5 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Smarcc2Q6PDG5 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Smarcc2Q6PDG5 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Smarcc2Q6PDG5 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Smarcc2Q6PDG5 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
Smarcc2Q6PDG5 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Smarcc2Q6PDG5 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Smarcc2Q6PDG5 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Smarcc2Q6PDG5 Cxcl14-202ENSMUST00000224801 1467 ntBASIC19.81■□□□□ 0.76
Smarcc2Q6PDG5 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Smarcc2Q6PDG5 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Smarcc2Q6PDG5 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Smarcc2Q6PDG5 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Smarcc2Q6PDG5 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC19.81■□□□□ 0.76
Smarcc2Q6PDG5 Gm11539-201ENSMUST00000119837 557 ntBASIC19.81■□□□□ 0.76
Smarcc2Q6PDG5 Gm13436-201ENSMUST00000120418 567 ntBASIC19.81■□□□□ 0.76
Smarcc2Q6PDG5 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Smarcc2Q6PDG5 Gm37025-201ENSMUST00000195159 829 ntBASIC19.81■□□□□ 0.76
Smarcc2Q6PDG5 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Smarcc2Q6PDG5 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Smarcc2Q6PDG5 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Smarcc2Q6PDG5 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Smarcc2Q6PDG5 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Smarcc2Q6PDG5 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
Smarcc2Q6PDG5 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Smarcc2Q6PDG5 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
Smarcc2Q6PDG5 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Smarcc2Q6PDG5 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC19.8■□□□□ 0.76
Smarcc2Q6PDG5 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Smarcc2Q6PDG5 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Smarcc2Q6PDG5 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Smarcc2Q6PDG5 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
Smarcc2Q6PDG5 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
Smarcc2Q6PDG5 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
Smarcc2Q6PDG5 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
Smarcc2Q6PDG5 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Smarcc2Q6PDG5 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
Smarcc2Q6PDG5 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
Smarcc2Q6PDG5 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
Smarcc2Q6PDG5 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Smarcc2Q6PDG5 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
Smarcc2Q6PDG5 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Smarcc2Q6PDG5 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Smarcc2Q6PDG5 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Smarcc2Q6PDG5 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Smarcc2Q6PDG5 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
Smarcc2Q6PDG5 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Smarcc2Q6PDG5 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
Smarcc2Q6PDG5 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Smarcc2Q6PDG5 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
Smarcc2Q6PDG5 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Smarcc2Q6PDG5 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Smarcc2Q6PDG5 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC19.79■□□□□ 0.76
Smarcc2Q6PDG5 Gm13836-201ENSMUST00000121159 501 ntBASIC19.79■□□□□ 0.76
Smarcc2Q6PDG5 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Smarcc2Q6PDG5 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Smarcc2Q6PDG5 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Smarcc2Q6PDG5 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC19.79■□□□□ 0.76
Smarcc2Q6PDG5 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 21.1 ms