Protein–RNA interactions for Protein: Q6P542

Abcf1, ATP-binding cassette sub-family F member 1, mousemouse

Known RBP Predictions only

Length 837 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abcf1Q6P542 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Abcf1Q6P542 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Abcf1Q6P542 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC19.04■□□□□ 0.64
Abcf1Q6P542 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Abcf1Q6P542 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC19.04■□□□□ 0.64
Abcf1Q6P542 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC19.04■□□□□ 0.64
Abcf1Q6P542 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Abcf1Q6P542 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Abcf1Q6P542 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Abcf1Q6P542 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC19.03■□□□□ 0.64
Abcf1Q6P542 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Abcf1Q6P542 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
Abcf1Q6P542 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Abcf1Q6P542 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Abcf1Q6P542 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC19.03■□□□□ 0.64
Abcf1Q6P542 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Abcf1Q6P542 AC163280.1-201ENSMUST00000228194 1100 ntBASIC19.03■□□□□ 0.64
Abcf1Q6P542 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Abcf1Q6P542 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC19.03■□□□□ 0.64
Abcf1Q6P542 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
Abcf1Q6P542 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
Abcf1Q6P542 Gm26596-201ENSMUST00000180464 2655 ntBASIC19.03■□□□□ 0.64
Abcf1Q6P542 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
Abcf1Q6P542 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Abcf1Q6P542 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Abcf1Q6P542 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Abcf1Q6P542 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
Abcf1Q6P542 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Abcf1Q6P542 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC19.02■□□□□ 0.64
Abcf1Q6P542 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Abcf1Q6P542 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
Abcf1Q6P542 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Abcf1Q6P542 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.63
Abcf1Q6P542 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Abcf1Q6P542 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Abcf1Q6P542 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
Abcf1Q6P542 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Abcf1Q6P542 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
Abcf1Q6P542 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
Abcf1Q6P542 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Abcf1Q6P542 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Abcf1Q6P542 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC19.01■□□□□ 0.63
Abcf1Q6P542 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
Abcf1Q6P542 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC19.01■□□□□ 0.63
Abcf1Q6P542 H2-K2-201ENSMUST00000174250 1049 ntBASIC19.01■□□□□ 0.63
Abcf1Q6P542 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Abcf1Q6P542 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Abcf1Q6P542 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Abcf1Q6P542 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Abcf1Q6P542 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Abcf1Q6P542 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Abcf1Q6P542 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Abcf1Q6P542 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Abcf1Q6P542 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
Abcf1Q6P542 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Abcf1Q6P542 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Abcf1Q6P542 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Abcf1Q6P542 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
Abcf1Q6P542 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC19■□□□□ 0.63
Abcf1Q6P542 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Abcf1Q6P542 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
Abcf1Q6P542 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC19■□□□□ 0.63
Abcf1Q6P542 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC19■□□□□ 0.63
Abcf1Q6P542 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Abcf1Q6P542 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC19■□□□□ 0.63
Abcf1Q6P542 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC19■□□□□ 0.63
Abcf1Q6P542 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Abcf1Q6P542 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC19■□□□□ 0.63
Abcf1Q6P542 Gm37820-201ENSMUST00000194021 2147 ntBASIC19■□□□□ 0.63
Abcf1Q6P542 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Abcf1Q6P542 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Abcf1Q6P542 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
Abcf1Q6P542 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
Abcf1Q6P542 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Abcf1Q6P542 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
Abcf1Q6P542 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Abcf1Q6P542 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
Abcf1Q6P542 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC18.99■□□□□ 0.63
Abcf1Q6P542 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC18.99■□□□□ 0.63
Abcf1Q6P542 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Abcf1Q6P542 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC18.99■□□□□ 0.63
Abcf1Q6P542 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Abcf1Q6P542 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Abcf1Q6P542 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC18.99■□□□□ 0.63
Abcf1Q6P542 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Abcf1Q6P542 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
Abcf1Q6P542 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Abcf1Q6P542 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Abcf1Q6P542 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
Abcf1Q6P542 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Abcf1Q6P542 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Abcf1Q6P542 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
Abcf1Q6P542 Gm15378-201ENSMUST00000121894 207 ntBASIC18.98■□□□□ 0.63
Abcf1Q6P542 Alkbh1-212ENSMUST00000185301 408 ntBASIC18.98■□□□□ 0.63
Abcf1Q6P542 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC18.98■□□□□ 0.63
Abcf1Q6P542 Mtag2-201ENSMUST00000058665 714 ntBASIC18.98■□□□□ 0.63
Abcf1Q6P542 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Abcf1Q6P542 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC18.98■□□□□ 0.63
Abcf1Q6P542 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Abcf1Q6P542 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 33.6 ms