Protein–RNA interactions for Protein: Q6NZK8

Ptpdc1, Protein tyrosine phosphatase domain-containing protein 1, mousemouse

Predictions only

Length 747 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptpdc1Q6NZK8 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Ptpdc1Q6NZK8 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC20.67■□□□□ 0.9
Ptpdc1Q6NZK8 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Ptpdc1Q6NZK8 Gm20472-201ENSMUST00000174403 1240 ntBASIC20.67■□□□□ 0.9
Ptpdc1Q6NZK8 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Ptpdc1Q6NZK8 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Ptpdc1Q6NZK8 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
Ptpdc1Q6NZK8 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Ptpdc1Q6NZK8 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
Ptpdc1Q6NZK8 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Ptpdc1Q6NZK8 AL590614.2-201ENSMUST00000225374 1937 ntBASIC20.66■□□□□ 0.9
Ptpdc1Q6NZK8 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Ptpdc1Q6NZK8 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Ptpdc1Q6NZK8 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
Ptpdc1Q6NZK8 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Ptpdc1Q6NZK8 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
Ptpdc1Q6NZK8 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC20.66■□□□□ 0.9
Ptpdc1Q6NZK8 Gm4217-201ENSMUST00000182243 1002 ntBASIC20.66■□□□□ 0.9
Ptpdc1Q6NZK8 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC20.66■□□□□ 0.9
Ptpdc1Q6NZK8 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Ptpdc1Q6NZK8 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC20.66■□□□□ 0.9
Ptpdc1Q6NZK8 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Ptpdc1Q6NZK8 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Ptpdc1Q6NZK8 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
Ptpdc1Q6NZK8 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Ptpdc1Q6NZK8 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Ptpdc1Q6NZK8 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Ptpdc1Q6NZK8 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Ptpdc1Q6NZK8 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
Ptpdc1Q6NZK8 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Ptpdc1Q6NZK8 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Ptpdc1Q6NZK8 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC20.65■□□□□ 0.9
Ptpdc1Q6NZK8 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Ptpdc1Q6NZK8 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
Ptpdc1Q6NZK8 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Ptpdc1Q6NZK8 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Ptpdc1Q6NZK8 Gm27463-201ENSMUST00000183569 57 ntBASIC20.65■□□□□ 0.9
Ptpdc1Q6NZK8 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Ptpdc1Q6NZK8 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
Ptpdc1Q6NZK8 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Ptpdc1Q6NZK8 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Ptpdc1Q6NZK8 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Ptpdc1Q6NZK8 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Ptpdc1Q6NZK8 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Ptpdc1Q6NZK8 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.9
Ptpdc1Q6NZK8 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC20.64■□□□□ 0.9
Ptpdc1Q6NZK8 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC20.64■□□□□ 0.89
Ptpdc1Q6NZK8 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Ptpdc1Q6NZK8 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Ptpdc1Q6NZK8 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Ptpdc1Q6NZK8 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Ptpdc1Q6NZK8 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC20.64■□□□□ 0.89
Ptpdc1Q6NZK8 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC20.64■□□□□ 0.89
Ptpdc1Q6NZK8 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Ptpdc1Q6NZK8 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Ptpdc1Q6NZK8 Gm30025-201ENSMUST00000218555 728 ntBASIC20.64■□□□□ 0.89
Ptpdc1Q6NZK8 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Ptpdc1Q6NZK8 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Ptpdc1Q6NZK8 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Ptpdc1Q6NZK8 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
Ptpdc1Q6NZK8 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Ptpdc1Q6NZK8 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
Ptpdc1Q6NZK8 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Ptpdc1Q6NZK8 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC20.63■□□□□ 0.89
Ptpdc1Q6NZK8 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
Ptpdc1Q6NZK8 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Ptpdc1Q6NZK8 Gm10252-201ENSMUST00000209541 832 ntBASIC20.63■□□□□ 0.89
Ptpdc1Q6NZK8 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Ptpdc1Q6NZK8 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Ptpdc1Q6NZK8 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Ptpdc1Q6NZK8 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC20.63■□□□□ 0.89
Ptpdc1Q6NZK8 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Ptpdc1Q6NZK8 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Ptpdc1Q6NZK8 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Ptpdc1Q6NZK8 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Ptpdc1Q6NZK8 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Ptpdc1Q6NZK8 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
Ptpdc1Q6NZK8 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Ptpdc1Q6NZK8 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Ptpdc1Q6NZK8 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Ptpdc1Q6NZK8 Gm18958-201ENSMUST00000174258 762 ntBASIC20.62■□□□□ 0.89
Ptpdc1Q6NZK8 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC20.62■□□□□ 0.89
Ptpdc1Q6NZK8 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Ptpdc1Q6NZK8 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Ptpdc1Q6NZK8 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Ptpdc1Q6NZK8 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Ptpdc1Q6NZK8 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Ptpdc1Q6NZK8 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Ptpdc1Q6NZK8 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
Ptpdc1Q6NZK8 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
Ptpdc1Q6NZK8 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Ptpdc1Q6NZK8 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC20.61■□□□□ 0.89
Ptpdc1Q6NZK8 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
Ptpdc1Q6NZK8 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Ptpdc1Q6NZK8 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Ptpdc1Q6NZK8 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC20.61■□□□□ 0.89
Ptpdc1Q6NZK8 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Ptpdc1Q6NZK8 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
Ptpdc1Q6NZK8 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
Ptpdc1Q6NZK8 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 24.7 ms