Protein–RNA interactions for Protein: Q69ZS0

Pdzrn3, E3 ubiquitin-protein ligase PDZRN3, mousemouse

Predictions only

Length 1,063 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdzrn3Q69ZS0 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.92
Pdzrn3Q69ZS0 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
Pdzrn3Q69ZS0 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
Pdzrn3Q69ZS0 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Pdzrn3Q69ZS0 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Pdzrn3Q69ZS0 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC20.82■□□□□ 0.92
Pdzrn3Q69ZS0 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
Pdzrn3Q69ZS0 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Pdzrn3Q69ZS0 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
Pdzrn3Q69ZS0 AC125311.2-201ENSMUST00000227477 1940 ntBASIC20.82■□□□□ 0.92
Pdzrn3Q69ZS0 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Pdzrn3Q69ZS0 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Pdzrn3Q69ZS0 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Pdzrn3Q69ZS0 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Pdzrn3Q69ZS0 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Pdzrn3Q69ZS0 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC20.81■□□□□ 0.92
Pdzrn3Q69ZS0 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
Pdzrn3Q69ZS0 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Pdzrn3Q69ZS0 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Pdzrn3Q69ZS0 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Pdzrn3Q69ZS0 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Pdzrn3Q69ZS0 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
Pdzrn3Q69ZS0 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Pdzrn3Q69ZS0 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC20.81■□□□□ 0.92
Pdzrn3Q69ZS0 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
Pdzrn3Q69ZS0 Umpk-ps-201ENSMUST00000211897 827 ntBASIC20.81■□□□□ 0.92
Pdzrn3Q69ZS0 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Pdzrn3Q69ZS0 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Pdzrn3Q69ZS0 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Pdzrn3Q69ZS0 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC20.8■□□□□ 0.92
Pdzrn3Q69ZS0 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Pdzrn3Q69ZS0 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Pdzrn3Q69ZS0 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Pdzrn3Q69ZS0 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Pdzrn3Q69ZS0 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC20.8■□□□□ 0.92
Pdzrn3Q69ZS0 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Pdzrn3Q69ZS0 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC20.8■□□□□ 0.92
Pdzrn3Q69ZS0 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC20.8■□□□□ 0.92
Pdzrn3Q69ZS0 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Pdzrn3Q69ZS0 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Pdzrn3Q69ZS0 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Pdzrn3Q69ZS0 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Pdzrn3Q69ZS0 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC20.8■□□□□ 0.92
Pdzrn3Q69ZS0 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Pdzrn3Q69ZS0 Gm18958-201ENSMUST00000174258 762 ntBASIC20.8■□□□□ 0.92
Pdzrn3Q69ZS0 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Pdzrn3Q69ZS0 Gm7461-201ENSMUST00000058918 827 ntBASIC20.8■□□□□ 0.92
Pdzrn3Q69ZS0 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Pdzrn3Q69ZS0 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Pdzrn3Q69ZS0 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Pdzrn3Q69ZS0 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Pdzrn3Q69ZS0 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Pdzrn3Q69ZS0 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Pdzrn3Q69ZS0 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC20.79■□□□□ 0.92
Pdzrn3Q69ZS0 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Pdzrn3Q69ZS0 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Pdzrn3Q69ZS0 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
Pdzrn3Q69ZS0 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
Pdzrn3Q69ZS0 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Pdzrn3Q69ZS0 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Pdzrn3Q69ZS0 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC20.79■□□□□ 0.92
Pdzrn3Q69ZS0 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Pdzrn3Q69ZS0 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Pdzrn3Q69ZS0 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
Pdzrn3Q69ZS0 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Pdzrn3Q69ZS0 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Pdzrn3Q69ZS0 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
Pdzrn3Q69ZS0 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC20.78■□□□□ 0.92
Pdzrn3Q69ZS0 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Pdzrn3Q69ZS0 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Pdzrn3Q69ZS0 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC20.78■□□□□ 0.92
Pdzrn3Q69ZS0 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Pdzrn3Q69ZS0 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Pdzrn3Q69ZS0 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Pdzrn3Q69ZS0 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC20.78■□□□□ 0.92
Pdzrn3Q69ZS0 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC20.78■□□□□ 0.92
Pdzrn3Q69ZS0 Gm27357-201ENSMUST00000183754 135 ntBASIC20.78■□□□□ 0.92
Pdzrn3Q69ZS0 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC20.78■□□□□ 0.92
Pdzrn3Q69ZS0 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Pdzrn3Q69ZS0 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Pdzrn3Q69ZS0 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Pdzrn3Q69ZS0 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
Pdzrn3Q69ZS0 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
Pdzrn3Q69ZS0 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
Pdzrn3Q69ZS0 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Pdzrn3Q69ZS0 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
Pdzrn3Q69ZS0 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
Pdzrn3Q69ZS0 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC20.78■□□□□ 0.92
Pdzrn3Q69ZS0 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Pdzrn3Q69ZS0 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC20.78■□□□□ 0.92
Pdzrn3Q69ZS0 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
Pdzrn3Q69ZS0 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
Pdzrn3Q69ZS0 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
Pdzrn3Q69ZS0 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC20.77■□□□□ 0.92
Pdzrn3Q69ZS0 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC20.77■□□□□ 0.92
Pdzrn3Q69ZS0 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Pdzrn3Q69ZS0 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
Pdzrn3Q69ZS0 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Pdzrn3Q69ZS0 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Pdzrn3Q69ZS0 Mir3081-201ENSMUST00000175305 84 ntBASIC20.77■□□□□ 0.92
Retrieved 100 of 76,532 protein–RNA pairs in 20.7 ms