Protein–RNA interactions for Protein: Q64287

Irf4, Interferon regulatory factor 4, mousemouse

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Irf4Q64287 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Irf4Q64287 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Irf4Q64287 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Irf4Q64287 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Irf4Q64287 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Irf4Q64287 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Irf4Q64287 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
Irf4Q64287 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Irf4Q64287 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Irf4Q64287 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Irf4Q64287 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Irf4Q64287 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Irf4Q64287 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC16.69■□□□□ 0.26
Irf4Q64287 Gm25016-201ENSMUST00000158399 131 ntBASIC16.69■□□□□ 0.26
Irf4Q64287 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Irf4Q64287 Gm33142-201ENSMUST00000193913 867 ntBASIC16.69■□□□□ 0.26
Irf4Q64287 Gm21362-201ENSMUST00000194272 928 ntBASIC16.69■□□□□ 0.26
Irf4Q64287 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Irf4Q64287 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Irf4Q64287 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Irf4Q64287 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
Irf4Q64287 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Irf4Q64287 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Irf4Q64287 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Irf4Q64287 Gm43808-201ENSMUST00000202534 2065 ntBASIC16.68■□□□□ 0.26
Irf4Q64287 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Irf4Q64287 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Irf4Q64287 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Irf4Q64287 Gm11355-201ENSMUST00000121120 306 ntBASIC16.68■□□□□ 0.26
Irf4Q64287 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Irf4Q64287 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC16.68■□□□□ 0.26
Irf4Q64287 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC16.68■□□□□ 0.26
Irf4Q64287 Gm5587-201ENSMUST00000206270 674 ntBASIC16.68■□□□□ 0.26
Irf4Q64287 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Irf4Q64287 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Irf4Q64287 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Irf4Q64287 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Irf4Q64287 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Irf4Q64287 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Irf4Q64287 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
Irf4Q64287 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Irf4Q64287 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
Irf4Q64287 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
Irf4Q64287 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Irf4Q64287 Gm37519-201ENSMUST00000191687 2210 ntBASIC16.68■□□□□ 0.26
Irf4Q64287 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Irf4Q64287 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Irf4Q64287 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Irf4Q64287 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
Irf4Q64287 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC16.67■□□□□ 0.26
Irf4Q64287 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Irf4Q64287 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
Irf4Q64287 Gm9013-201ENSMUST00000132939 882 ntBASIC16.67■□□□□ 0.26
Irf4Q64287 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC16.67■□□□□ 0.26
Irf4Q64287 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC16.67■□□□□ 0.26
Irf4Q64287 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Irf4Q64287 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Irf4Q64287 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Irf4Q64287 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
Irf4Q64287 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Irf4Q64287 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Irf4Q64287 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Irf4Q64287 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Irf4Q64287 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Irf4Q64287 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC16.66■□□□□ 0.26
Irf4Q64287 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Irf4Q64287 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Irf4Q64287 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Irf4Q64287 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
Irf4Q64287 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Irf4Q64287 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
Irf4Q64287 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC16.66■□□□□ 0.26
Irf4Q64287 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Irf4Q64287 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Irf4Q64287 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Irf4Q64287 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Irf4Q64287 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
Irf4Q64287 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Irf4Q64287 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Irf4Q64287 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
Irf4Q64287 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Irf4Q64287 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
Irf4Q64287 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Irf4Q64287 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Irf4Q64287 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Irf4Q64287 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC16.65■□□□□ 0.26
Irf4Q64287 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Irf4Q64287 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Irf4Q64287 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Irf4Q64287 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Irf4Q64287 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Irf4Q64287 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Irf4Q64287 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Irf4Q64287 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC16.65■□□□□ 0.26
Irf4Q64287 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC16.65■□□□□ 0.26
Irf4Q64287 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC16.65■□□□□ 0.26
Irf4Q64287 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Irf4Q64287 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Irf4Q64287 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Irf4Q64287 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 30.8 ms