Protein–RNA interactions for Protein: Q62233

Six3, Homeobox protein SIX3, mousemouse

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six3Q62233 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Six3Q62233 Haglr-201ENSMUST00000100000 2085 ntBASIC16.62■□□□□ 0.25
Six3Q62233 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Six3Q62233 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Six3Q62233 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Six3Q62233 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Six3Q62233 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Six3Q62233 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Six3Q62233 Ddx41-204ENSMUST00000224765 2199 ntBASIC16.62■□□□□ 0.25
Six3Q62233 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Six3Q62233 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Six3Q62233 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Six3Q62233 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
Six3Q62233 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Six3Q62233 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Six3Q62233 AC124581.1-201ENSMUST00000225416 1399 ntBASIC16.62■□□□□ 0.25
Six3Q62233 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC16.62■□□□□ 0.25
Six3Q62233 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC16.62■□□□□ 0.25
Six3Q62233 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Six3Q62233 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Six3Q62233 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
Six3Q62233 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC16.61■□□□□ 0.25
Six3Q62233 Gm15378-201ENSMUST00000121894 207 ntBASIC16.61■□□□□ 0.25
Six3Q62233 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Six3Q62233 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC16.61■□□□□ 0.25
Six3Q62233 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Six3Q62233 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Six3Q62233 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC16.61■□□□□ 0.25
Six3Q62233 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Six3Q62233 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Six3Q62233 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Six3Q62233 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Six3Q62233 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Six3Q62233 Cxcl14-202ENSMUST00000224801 1467 ntBASIC16.61■□□□□ 0.25
Six3Q62233 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Six3Q62233 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC16.6■□□□□ 0.25
Six3Q62233 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Six3Q62233 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC16.6■□□□□ 0.25
Six3Q62233 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Six3Q62233 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Six3Q62233 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Six3Q62233 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Six3Q62233 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
Six3Q62233 Gm10653-202ENSMUST00000139570 835 ntBASIC16.6■□□□□ 0.25
Six3Q62233 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Six3Q62233 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC16.6■□□□□ 0.25
Six3Q62233 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Six3Q62233 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC16.6■□□□□ 0.25
Six3Q62233 Gm36858-201ENSMUST00000194501 2391 ntBASIC16.6■□□□□ 0.25
Six3Q62233 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC16.6■□□□□ 0.25
Six3Q62233 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
Six3Q62233 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Six3Q62233 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Six3Q62233 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Six3Q62233 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Six3Q62233 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Six3Q62233 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Six3Q62233 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Six3Q62233 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
Six3Q62233 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Six3Q62233 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Six3Q62233 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Six3Q62233 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
Six3Q62233 Gm13216-201ENSMUST00000117145 591 ntBASIC16.59■□□□□ 0.25
Six3Q62233 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC16.59■□□□□ 0.25
Six3Q62233 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Six3Q62233 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Six3Q62233 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Six3Q62233 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Six3Q62233 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Six3Q62233 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC16.59■□□□□ 0.25
Six3Q62233 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
Six3Q62233 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Six3Q62233 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Six3Q62233 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Six3Q62233 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC16.59■□□□□ 0.25
Six3Q62233 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.25
Six3Q62233 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Six3Q62233 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.25
Six3Q62233 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Six3Q62233 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC16.58■□□□□ 0.25
Six3Q62233 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Six3Q62233 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Six3Q62233 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC16.58■□□□□ 0.24
Six3Q62233 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC16.58■□□□□ 0.24
Six3Q62233 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Six3Q62233 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Six3Q62233 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Six3Q62233 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Six3Q62233 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Six3Q62233 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Six3Q62233 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
Six3Q62233 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC16.58■□□□□ 0.24
Six3Q62233 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Six3Q62233 Gm20628-201ENSMUST00000177363 3215 ntBASIC16.57■□□□□ 0.24
Six3Q62233 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Six3Q62233 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Six3Q62233 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
Six3Q62233 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Six3Q62233 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 25 ms