Protein–RNA interactions for Protein: Q61572

Foxc1, Forkhead box protein C1, mousemouse

Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxc1Q61572 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC12.5□□□□□ -0.41
Foxc1Q61572 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Foxc1Q61572 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC12.5□□□□□ -0.41
Foxc1Q61572 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC12.49□□□□□ -0.41
Foxc1Q61572 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Foxc1Q61572 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Foxc1Q61572 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Foxc1Q61572 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Foxc1Q61572 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Foxc1Q61572 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Foxc1Q61572 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Foxc1Q61572 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Foxc1Q61572 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Foxc1Q61572 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Foxc1Q61572 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Foxc1Q61572 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Foxc1Q61572 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Foxc1Q61572 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Foxc1Q61572 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Foxc1Q61572 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
Foxc1Q61572 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Foxc1Q61572 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Foxc1Q61572 Il4-203ENSMUST00000140684 530 ntTSL 2 BASIC12.49□□□□□ -0.41
Foxc1Q61572 Il4-204ENSMUST00000150568 605 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Foxc1Q61572 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC12.49□□□□□ -0.41
Foxc1Q61572 Gm31048-201ENSMUST00000196103 1061 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Foxc1Q61572 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Foxc1Q61572 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Foxc1Q61572 Il4-201ENSMUST00000000889 590 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Foxc1Q61572 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Foxc1Q61572 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Foxc1Q61572 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Foxc1Q61572 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Foxc1Q61572 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC12.49□□□□□ -0.41
Foxc1Q61572 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Foxc1Q61572 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Foxc1Q61572 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Foxc1Q61572 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Foxc1Q61572 Eml5-210ENSMUST00000223282 7595 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Foxc1Q61572 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Foxc1Q61572 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Foxc1Q61572 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Foxc1Q61572 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Foxc1Q61572 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC12.48□□□□□ -0.41
Foxc1Q61572 Nr3c2-204ENSMUST00000109913 5916 ntAPPRIS P2 TSL 5 BASIC12.48□□□□□ -0.41
Foxc1Q61572 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Foxc1Q61572 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
Foxc1Q61572 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Foxc1Q61572 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Foxc1Q61572 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Foxc1Q61572 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Foxc1Q61572 Gm6433-201ENSMUST00000118634 875 ntBASIC12.48□□□□□ -0.41
Foxc1Q61572 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Foxc1Q61572 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Foxc1Q61572 Gm43799-201ENSMUST00000201845 579 ntBASIC12.48□□□□□ -0.41
Foxc1Q61572 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Foxc1Q61572 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC12.48□□□□□ -0.41
Foxc1Q61572 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Foxc1Q61572 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Foxc1Q61572 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Foxc1Q61572 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Foxc1Q61572 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Foxc1Q61572 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Foxc1Q61572 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Foxc1Q61572 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC12.48□□□□□ -0.41
Foxc1Q61572 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Foxc1Q61572 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Foxc1Q61572 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC12.47□□□□□ -0.41
Foxc1Q61572 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC12.47□□□□□ -0.41
Foxc1Q61572 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Foxc1Q61572 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Foxc1Q61572 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC12.47□□□□□ -0.41
Foxc1Q61572 Gm13401-201ENSMUST00000117074 291 ntBASIC12.47□□□□□ -0.41
Foxc1Q61572 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC12.47□□□□□ -0.41
Foxc1Q61572 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC12.47□□□□□ -0.41
Foxc1Q61572 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Foxc1Q61572 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Foxc1Q61572 Gm4974-201ENSMUST00000209974 875 ntBASIC12.47□□□□□ -0.41
Foxc1Q61572 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Foxc1Q61572 Timm23-208ENSMUST00000226683 750 ntBASIC12.47□□□□□ -0.41
Foxc1Q61572 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Foxc1Q61572 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Foxc1Q61572 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
Foxc1Q61572 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Foxc1Q61572 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
Foxc1Q61572 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Foxc1Q61572 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Foxc1Q61572 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Foxc1Q61572 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Foxc1Q61572 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Foxc1Q61572 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Foxc1Q61572 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Foxc1Q61572 Med14-202ENSMUST00000096495 6963 ntAPPRIS P2 TSL 5 BASIC12.47□□□□□ -0.41
Foxc1Q61572 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Foxc1Q61572 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Foxc1Q61572 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC12.46□□□□□ -0.41
Foxc1Q61572 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Foxc1Q61572 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC12.46□□□□□ -0.41
Foxc1Q61572 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Foxc1Q61572 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 22.8 ms