Protein–RNA interactions for Protein: Q61115

Ptch1, Protein patched homolog 1, mousemouse

Predictions only

Length 1,434 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptch1Q61115 Gm13849-201ENSMUST00000153328 835 ntTSL 5 BASIC24.56■■□□□ 1.52
Ptch1Q61115 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
Ptch1Q61115 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC24.56■■□□□ 1.52
Ptch1Q61115 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC24.56■■□□□ 1.52
Ptch1Q61115 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC24.56■■□□□ 1.52
Ptch1Q61115 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
Ptch1Q61115 AC125311.2-201ENSMUST00000227477 1940 ntBASIC24.55■■□□□ 1.52
Ptch1Q61115 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC24.55■■□□□ 1.52
Ptch1Q61115 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC24.55■■□□□ 1.52
Ptch1Q61115 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC24.55■■□□□ 1.52
Ptch1Q61115 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC24.54■■□□□ 1.52
Ptch1Q61115 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
Ptch1Q61115 AV026068-213ENSMUST00000223675 1171 ntBASIC24.54■■□□□ 1.52
Ptch1Q61115 1600017P15Rik-201ENSMUST00000083427 412 ntBASIC24.54■■□□□ 1.52
Ptch1Q61115 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC24.54■■□□□ 1.52
Ptch1Q61115 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
Ptch1Q61115 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
Ptch1Q61115 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
Ptch1Q61115 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
Ptch1Q61115 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC24.54■■□□□ 1.52
Ptch1Q61115 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
Ptch1Q61115 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
Ptch1Q61115 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC24.53■■□□□ 1.52
Ptch1Q61115 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
Ptch1Q61115 Gssos1-201ENSMUST00000142509 716 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
Ptch1Q61115 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
Ptch1Q61115 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
Ptch1Q61115 Gm27628-201ENSMUST00000184911 107 ntBASIC24.53■■□□□ 1.52
Ptch1Q61115 Gm6550-201ENSMUST00000187574 993 ntBASIC24.53■■□□□ 1.52
Ptch1Q61115 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
Ptch1Q61115 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC24.53■■□□□ 1.52
Ptch1Q61115 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
Ptch1Q61115 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC24.53■■□□□ 1.52
Ptch1Q61115 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
Ptch1Q61115 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
Ptch1Q61115 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
Ptch1Q61115 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
Ptch1Q61115 Gm43231-201ENSMUST00000202960 2258 ntBASIC24.53■■□□□ 1.52
Ptch1Q61115 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC24.53■■□□□ 1.52
Ptch1Q61115 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC24.52■■□□□ 1.52
Ptch1Q61115 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC24.52■■□□□ 1.52
Ptch1Q61115 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
Ptch1Q61115 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
Ptch1Q61115 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
Ptch1Q61115 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC24.52■■□□□ 1.52
Ptch1Q61115 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
Ptch1Q61115 Gm13036-201ENSMUST00000117799 748 ntBASIC24.52■■□□□ 1.52
Ptch1Q61115 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC24.52■■□□□ 1.52
Ptch1Q61115 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC24.52■■□□□ 1.52
Ptch1Q61115 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
Ptch1Q61115 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC24.51■■□□□ 1.51
Ptch1Q61115 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC24.51■■□□□ 1.51
Ptch1Q61115 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
Ptch1Q61115 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC24.51■■□□□ 1.51
Ptch1Q61115 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
Ptch1Q61115 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC24.51■■□□□ 1.51
Ptch1Q61115 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
Ptch1Q61115 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC24.51■■□□□ 1.51
Ptch1Q61115 AC090659.1-201ENSMUST00000224334 768 ntBASIC24.51■■□□□ 1.51
Ptch1Q61115 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
Ptch1Q61115 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
Ptch1Q61115 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
Ptch1Q61115 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC24.5■■□□□ 1.51
Ptch1Q61115 AC122901.1-201ENSMUST00000214203 1790 ntBASIC24.5■■□□□ 1.51
Ptch1Q61115 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
Ptch1Q61115 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
Ptch1Q61115 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
Ptch1Q61115 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC24.5■■□□□ 1.51
Ptch1Q61115 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC24.5■■□□□ 1.51
Ptch1Q61115 Gm37584-201ENSMUST00000193595 1290 ntBASIC24.5■■□□□ 1.51
Ptch1Q61115 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
Ptch1Q61115 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
Ptch1Q61115 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC24.5■■□□□ 1.51
Ptch1Q61115 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC24.5■■□□□ 1.51
Ptch1Q61115 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
Ptch1Q61115 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
Ptch1Q61115 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC24.5■■□□□ 1.51
Ptch1Q61115 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC24.5■■□□□ 1.51
Ptch1Q61115 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
Ptch1Q61115 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC24.49■■□□□ 1.51
Ptch1Q61115 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
Ptch1Q61115 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
Ptch1Q61115 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC24.49■■□□□ 1.51
Ptch1Q61115 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC24.49■■□□□ 1.51
Ptch1Q61115 Haghl-211ENSMUST00000150324 1267 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
Ptch1Q61115 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
Ptch1Q61115 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC24.49■■□□□ 1.51
Ptch1Q61115 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
Ptch1Q61115 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC24.49■■□□□ 1.51
Ptch1Q61115 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC24.49■■□□□ 1.51
Ptch1Q61115 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC24.49■■□□□ 1.51
Ptch1Q61115 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
Ptch1Q61115 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
Ptch1Q61115 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC24.49■■□□□ 1.51
Ptch1Q61115 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
Ptch1Q61115 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
Ptch1Q61115 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
Ptch1Q61115 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
Ptch1Q61115 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
Ptch1Q61115 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
Retrieved 100 of 76,532 protein–RNA pairs in 21.2 ms