Protein–RNA interactions for Protein: Q61045

Sim1, Single-minded homolog 1, mousemouse

Predictions only

Length 765 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sim1Q61045 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Sim1Q61045 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Sim1Q61045 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Sim1Q61045 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Sim1Q61045 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Sim1Q61045 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Sim1Q61045 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Sim1Q61045 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Sim1Q61045 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC16.86■□□□□ 0.29
Sim1Q61045 Gm8969-201ENSMUST00000199694 526 ntBASIC16.86■□□□□ 0.29
Sim1Q61045 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC16.86■□□□□ 0.29
Sim1Q61045 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Sim1Q61045 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Sim1Q61045 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC16.86■□□□□ 0.29
Sim1Q61045 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Sim1Q61045 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
Sim1Q61045 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Sim1Q61045 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Sim1Q61045 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Sim1Q61045 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC16.86■□□□□ 0.29
Sim1Q61045 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
Sim1Q61045 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
Sim1Q61045 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Sim1Q61045 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Sim1Q61045 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Sim1Q61045 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
Sim1Q61045 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC16.85■□□□□ 0.29
Sim1Q61045 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC16.85■□□□□ 0.29
Sim1Q61045 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Sim1Q61045 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Sim1Q61045 Gm25925-201ENSMUST00000158314 306 ntBASIC16.85■□□□□ 0.29
Sim1Q61045 Gm17808-201ENSMUST00000200859 894 ntBASIC16.85■□□□□ 0.29
Sim1Q61045 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Sim1Q61045 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Sim1Q61045 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Sim1Q61045 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Sim1Q61045 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Sim1Q61045 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Sim1Q61045 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Sim1Q61045 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Sim1Q61045 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Sim1Q61045 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
Sim1Q61045 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
Sim1Q61045 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Sim1Q61045 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC16.84■□□□□ 0.29
Sim1Q61045 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC16.84■□□□□ 0.29
Sim1Q61045 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC16.84■□□□□ 0.29
Sim1Q61045 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Sim1Q61045 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Sim1Q61045 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Sim1Q61045 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Sim1Q61045 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Sim1Q61045 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Sim1Q61045 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Sim1Q61045 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Sim1Q61045 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Sim1Q61045 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Sim1Q61045 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Sim1Q61045 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Sim1Q61045 Gm18958-201ENSMUST00000174258 762 ntBASIC16.83■□□□□ 0.28
Sim1Q61045 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
Sim1Q61045 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC16.83■□□□□ 0.28
Sim1Q61045 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Sim1Q61045 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Sim1Q61045 Mzt1-203ENSMUST00000227948 952 ntBASIC16.83■□□□□ 0.28
Sim1Q61045 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Sim1Q61045 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Sim1Q61045 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Sim1Q61045 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Sim1Q61045 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
Sim1Q61045 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Sim1Q61045 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
Sim1Q61045 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Sim1Q61045 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC16.82■□□□□ 0.28
Sim1Q61045 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Sim1Q61045 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Sim1Q61045 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Sim1Q61045 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC16.82■□□□□ 0.28
Sim1Q61045 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
Sim1Q61045 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
Sim1Q61045 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Sim1Q61045 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Sim1Q61045 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Sim1Q61045 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Sim1Q61045 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Sim1Q61045 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Sim1Q61045 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Sim1Q61045 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
Sim1Q61045 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Sim1Q61045 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC16.82■□□□□ 0.28
Sim1Q61045 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Sim1Q61045 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Sim1Q61045 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC16.81■□□□□ 0.28
Sim1Q61045 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC16.81■□□□□ 0.28
Sim1Q61045 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Sim1Q61045 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Sim1Q61045 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Sim1Q61045 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Sim1Q61045 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Sim1Q61045 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 34.6 ms