Protein–RNA interactions for Protein: Q60649

Clpb, Caseinolytic peptidase B protein homolog, mousemouse

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClpbQ60649 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC16.33■□□□□ 0.21
ClpbQ60649 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.21
ClpbQ60649 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
ClpbQ60649 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
ClpbQ60649 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
ClpbQ60649 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC16.33■□□□□ 0.2
ClpbQ60649 Gm12085-201ENSMUST00000119263 940 ntBASIC16.33■□□□□ 0.2
ClpbQ60649 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC16.33■□□□□ 0.2
ClpbQ60649 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC16.33■□□□□ 0.2
ClpbQ60649 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
ClpbQ60649 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
ClpbQ60649 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC16.33■□□□□ 0.2
ClpbQ60649 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
ClpbQ60649 AC153881.2-201ENSMUST00000214877 204 ntBASIC16.33■□□□□ 0.2
ClpbQ60649 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
ClpbQ60649 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
ClpbQ60649 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC16.33■□□□□ 0.2
ClpbQ60649 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
ClpbQ60649 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
ClpbQ60649 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
ClpbQ60649 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
ClpbQ60649 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
ClpbQ60649 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC16.33■□□□□ 0.2
ClpbQ60649 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
ClpbQ60649 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
ClpbQ60649 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
ClpbQ60649 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
ClpbQ60649 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
ClpbQ60649 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
ClpbQ60649 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
ClpbQ60649 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
ClpbQ60649 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC16.32■□□□□ 0.2
ClpbQ60649 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC16.32■□□□□ 0.2
ClpbQ60649 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
ClpbQ60649 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
ClpbQ60649 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
ClpbQ60649 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
ClpbQ60649 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
ClpbQ60649 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
ClpbQ60649 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC16.32■□□□□ 0.2
ClpbQ60649 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
ClpbQ60649 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
ClpbQ60649 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
ClpbQ60649 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
ClpbQ60649 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
ClpbQ60649 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
ClpbQ60649 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC16.31■□□□□ 0.2
ClpbQ60649 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
ClpbQ60649 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
ClpbQ60649 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
ClpbQ60649 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
ClpbQ60649 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
ClpbQ60649 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
ClpbQ60649 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
ClpbQ60649 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
ClpbQ60649 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
ClpbQ60649 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
ClpbQ60649 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
ClpbQ60649 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
ClpbQ60649 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
ClpbQ60649 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
ClpbQ60649 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
ClpbQ60649 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
ClpbQ60649 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
ClpbQ60649 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
ClpbQ60649 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
ClpbQ60649 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
ClpbQ60649 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
ClpbQ60649 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
ClpbQ60649 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
ClpbQ60649 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
ClpbQ60649 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
ClpbQ60649 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC16.3■□□□□ 0.2
ClpbQ60649 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
ClpbQ60649 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC16.3■□□□□ 0.2
ClpbQ60649 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
ClpbQ60649 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
ClpbQ60649 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
ClpbQ60649 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
ClpbQ60649 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
ClpbQ60649 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
ClpbQ60649 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
ClpbQ60649 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
ClpbQ60649 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC16.29■□□□□ 0.2
ClpbQ60649 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
ClpbQ60649 Gm43799-201ENSMUST00000201845 579 ntBASIC16.29■□□□□ 0.2
ClpbQ60649 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
ClpbQ60649 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
ClpbQ60649 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC16.29■□□□□ 0.2
ClpbQ60649 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
ClpbQ60649 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
ClpbQ60649 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
ClpbQ60649 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
ClpbQ60649 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
ClpbQ60649 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
ClpbQ60649 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
ClpbQ60649 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
ClpbQ60649 Gm38027-201ENSMUST00000192315 235 ntBASIC16.28■□□□□ 0.2
ClpbQ60649 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
ClpbQ60649 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 30.4 ms