Protein–RNA interactions for Protein: Q5XF90

Atp13a4, Probable cation-transporting ATPase 13A4, mousemouse

Predictions only

Length 1,193 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atp13a4Q5XF90 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Atp13a4Q5XF90 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Atp13a4Q5XF90 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC18.39■□□□□ 0.53
Atp13a4Q5XF90 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Atp13a4Q5XF90 Gm11841-201ENSMUST00000117060 1963 ntBASIC18.39■□□□□ 0.53
Atp13a4Q5XF90 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Atp13a4Q5XF90 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC18.39■□□□□ 0.53
Atp13a4Q5XF90 Gm16401-202ENSMUST00000197463 2074 ntBASIC18.38■□□□□ 0.53
Atp13a4Q5XF90 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC18.38■□□□□ 0.53
Atp13a4Q5XF90 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Atp13a4Q5XF90 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Atp13a4Q5XF90 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC18.38■□□□□ 0.53
Atp13a4Q5XF90 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC18.38■□□□□ 0.53
Atp13a4Q5XF90 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
Atp13a4Q5XF90 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Atp13a4Q5XF90 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC18.38■□□□□ 0.53
Atp13a4Q5XF90 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC18.38■□□□□ 0.53
Atp13a4Q5XF90 Mir6982-201ENSMUST00000184354 68 ntBASIC18.38■□□□□ 0.53
Atp13a4Q5XF90 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Atp13a4Q5XF90 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
Atp13a4Q5XF90 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Atp13a4Q5XF90 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Atp13a4Q5XF90 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Atp13a4Q5XF90 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Atp13a4Q5XF90 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Atp13a4Q5XF90 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
Atp13a4Q5XF90 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
Atp13a4Q5XF90 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Atp13a4Q5XF90 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
Atp13a4Q5XF90 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Atp13a4Q5XF90 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Atp13a4Q5XF90 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
Atp13a4Q5XF90 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Atp13a4Q5XF90 AL590614.2-201ENSMUST00000225374 1937 ntBASIC18.37■□□□□ 0.53
Atp13a4Q5XF90 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC18.37■□□□□ 0.53
Atp13a4Q5XF90 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Atp13a4Q5XF90 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Atp13a4Q5XF90 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC18.37■□□□□ 0.53
Atp13a4Q5XF90 Gm15565-201ENSMUST00000118890 427 ntBASIC18.37■□□□□ 0.53
Atp13a4Q5XF90 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Atp13a4Q5XF90 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC18.37■□□□□ 0.53
Atp13a4Q5XF90 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Atp13a4Q5XF90 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
Atp13a4Q5XF90 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
Atp13a4Q5XF90 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Atp13a4Q5XF90 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Atp13a4Q5XF90 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC18.37■□□□□ 0.53
Atp13a4Q5XF90 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Atp13a4Q5XF90 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Atp13a4Q5XF90 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Atp13a4Q5XF90 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Atp13a4Q5XF90 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Atp13a4Q5XF90 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Atp13a4Q5XF90 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Atp13a4Q5XF90 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
Atp13a4Q5XF90 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Atp13a4Q5XF90 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Atp13a4Q5XF90 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
Atp13a4Q5XF90 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Atp13a4Q5XF90 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
Atp13a4Q5XF90 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
Atp13a4Q5XF90 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Atp13a4Q5XF90 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
Atp13a4Q5XF90 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Atp13a4Q5XF90 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Atp13a4Q5XF90 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Atp13a4Q5XF90 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC18.35■□□□□ 0.53
Atp13a4Q5XF90 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Atp13a4Q5XF90 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Atp13a4Q5XF90 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Atp13a4Q5XF90 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
Atp13a4Q5XF90 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Atp13a4Q5XF90 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Atp13a4Q5XF90 Gm13559-201ENSMUST00000120476 863 ntBASIC18.35■□□□□ 0.53
Atp13a4Q5XF90 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Atp13a4Q5XF90 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC18.35■□□□□ 0.53
Atp13a4Q5XF90 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
Atp13a4Q5XF90 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
Atp13a4Q5XF90 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC18.35■□□□□ 0.53
Atp13a4Q5XF90 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Atp13a4Q5XF90 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Atp13a4Q5XF90 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
Atp13a4Q5XF90 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Atp13a4Q5XF90 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Atp13a4Q5XF90 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC18.34■□□□□ 0.53
Atp13a4Q5XF90 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Atp13a4Q5XF90 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC18.34■□□□□ 0.53
Atp13a4Q5XF90 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Atp13a4Q5XF90 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Atp13a4Q5XF90 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
Atp13a4Q5XF90 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Atp13a4Q5XF90 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Atp13a4Q5XF90 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Atp13a4Q5XF90 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
Atp13a4Q5XF90 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.53
Atp13a4Q5XF90 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Atp13a4Q5XF90 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Atp13a4Q5XF90 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Atp13a4Q5XF90 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Atp13a4Q5XF90 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 32.1 ms