Protein–RNA interactions for Protein: Q5R1H8

Trav8d-1, T cell receptor alpha variable 8D-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8d-1Q5R1H8 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC13.98□□□□□ -0.17
Trav8d-1Q5R1H8 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav8d-1Q5R1H8 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav8d-1Q5R1H8 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav8d-1Q5R1H8 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav8d-1Q5R1H8 Gm29257-201ENSMUST00000186115 639 ntBASIC13.98□□□□□ -0.17
Trav8d-1Q5R1H8 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
Trav8d-1Q5R1H8 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav8d-1Q5R1H8 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav8d-1Q5R1H8 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav8d-1Q5R1H8 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav8d-1Q5R1H8 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav8d-1Q5R1H8 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
Trav8d-1Q5R1H8 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav8d-1Q5R1H8 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav8d-1Q5R1H8 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC13.98□□□□□ -0.17
Trav8d-1Q5R1H8 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Trav8d-1Q5R1H8 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav8d-1Q5R1H8 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav8d-1Q5R1H8 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
Trav8d-1Q5R1H8 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav8d-1Q5R1H8 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav8d-1Q5R1H8 Gm13509-201ENSMUST00000119733 1308 ntBASIC13.97□□□□□ -0.17
Trav8d-1Q5R1H8 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
Trav8d-1Q5R1H8 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav8d-1Q5R1H8 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
Trav8d-1Q5R1H8 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC13.97□□□□□ -0.17
Trav8d-1Q5R1H8 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
Trav8d-1Q5R1H8 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav8d-1Q5R1H8 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav8d-1Q5R1H8 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC13.97□□□□□ -0.17
Trav8d-1Q5R1H8 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC13.97□□□□□ -0.17
Trav8d-1Q5R1H8 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav8d-1Q5R1H8 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav8d-1Q5R1H8 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
Trav8d-1Q5R1H8 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav8d-1Q5R1H8 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
Trav8d-1Q5R1H8 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav8d-1Q5R1H8 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav8d-1Q5R1H8 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trav8d-1Q5R1H8 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC13.96□□□□□ -0.17
Trav8d-1Q5R1H8 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trav8d-1Q5R1H8 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trav8d-1Q5R1H8 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC13.96□□□□□ -0.17
Trav8d-1Q5R1H8 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trav8d-1Q5R1H8 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trav8d-1Q5R1H8 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trav8d-1Q5R1H8 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trav8d-1Q5R1H8 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
Trav8d-1Q5R1H8 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trav8d-1Q5R1H8 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trav8d-1Q5R1H8 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC13.96□□□□□ -0.17
Trav8d-1Q5R1H8 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC13.96□□□□□ -0.17
Trav8d-1Q5R1H8 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC13.96□□□□□ -0.17
Trav8d-1Q5R1H8 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
Trav8d-1Q5R1H8 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trav8d-1Q5R1H8 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trav8d-1Q5R1H8 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trav8d-1Q5R1H8 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trav8d-1Q5R1H8 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
Trav8d-1Q5R1H8 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trav8d-1Q5R1H8 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trav8d-1Q5R1H8 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.18
Trav8d-1Q5R1H8 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.18
Trav8d-1Q5R1H8 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.18
Trav8d-1Q5R1H8 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Trav8d-1Q5R1H8 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Trav8d-1Q5R1H8 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav8d-1Q5R1H8 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Trav8d-1Q5R1H8 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav8d-1Q5R1H8 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav8d-1Q5R1H8 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC13.95□□□□□ -0.18
Trav8d-1Q5R1H8 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav8d-1Q5R1H8 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav8d-1Q5R1H8 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
Trav8d-1Q5R1H8 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC13.95□□□□□ -0.18
Trav8d-1Q5R1H8 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC13.95□□□□□ -0.18
Trav8d-1Q5R1H8 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC13.95□□□□□ -0.18
Trav8d-1Q5R1H8 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav8d-1Q5R1H8 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
Trav8d-1Q5R1H8 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
Trav8d-1Q5R1H8 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Trav8d-1Q5R1H8 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav8d-1Q5R1H8 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Trav8d-1Q5R1H8 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav8d-1Q5R1H8 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav8d-1Q5R1H8 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Trav8d-1Q5R1H8 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav8d-1Q5R1H8 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav8d-1Q5R1H8 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav8d-1Q5R1H8 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Trav8d-1Q5R1H8 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav8d-1Q5R1H8 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC13.94□□□□□ -0.18
Trav8d-1Q5R1H8 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav8d-1Q5R1H8 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav8d-1Q5R1H8 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Trav8d-1Q5R1H8 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC13.94□□□□□ -0.18
Trav8d-1Q5R1H8 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav8d-1Q5R1H8 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
Trav8d-1Q5R1H8 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 19.4 ms