Protein–RNA interactions for Protein: Q5R1F6

Trav5d-4, T cell receptor alpha variable 5D-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5d-4Q5R1F6 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC14.63□□□□□ -0.07
Trav5d-4Q5R1F6 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC14.63□□□□□ -0.07
Trav5d-4Q5R1F6 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
Trav5d-4Q5R1F6 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Trav5d-4Q5R1F6 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav5d-4Q5R1F6 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
Trav5d-4Q5R1F6 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Trav5d-4Q5R1F6 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav5d-4Q5R1F6 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav5d-4Q5R1F6 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Trav5d-4Q5R1F6 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
Trav5d-4Q5R1F6 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav5d-4Q5R1F6 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav5d-4Q5R1F6 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav5d-4Q5R1F6 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav5d-4Q5R1F6 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav5d-4Q5R1F6 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
Trav5d-4Q5R1F6 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Trav5d-4Q5R1F6 Gm8520-201ENSMUST00000186517 868 ntBASIC14.62□□□□□ -0.07
Trav5d-4Q5R1F6 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC14.62□□□□□ -0.07
Trav5d-4Q5R1F6 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav5d-4Q5R1F6 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav5d-4Q5R1F6 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav5d-4Q5R1F6 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav5d-4Q5R1F6 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav5d-4Q5R1F6 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC14.62□□□□□ -0.07
Trav5d-4Q5R1F6 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC14.62□□□□□ -0.07
Trav5d-4Q5R1F6 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav5d-4Q5R1F6 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
Trav5d-4Q5R1F6 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC14.62□□□□□ -0.07
Trav5d-4Q5R1F6 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Trav5d-4Q5R1F6 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav5d-4Q5R1F6 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav5d-4Q5R1F6 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
Trav5d-4Q5R1F6 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Trav5d-4Q5R1F6 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
Trav5d-4Q5R1F6 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Trav5d-4Q5R1F6 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav5d-4Q5R1F6 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav5d-4Q5R1F6 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav5d-4Q5R1F6 Gm16401-202ENSMUST00000197463 2074 ntBASIC14.61□□□□□ -0.07
Trav5d-4Q5R1F6 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Trav5d-4Q5R1F6 Mir1199-201ENSMUST00000117015 119 ntBASIC14.61□□□□□ -0.07
Trav5d-4Q5R1F6 Gm12085-201ENSMUST00000119263 940 ntBASIC14.61□□□□□ -0.07
Trav5d-4Q5R1F6 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav5d-4Q5R1F6 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav5d-4Q5R1F6 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav5d-4Q5R1F6 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav5d-4Q5R1F6 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Trav5d-4Q5R1F6 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav5d-4Q5R1F6 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav5d-4Q5R1F6 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav5d-4Q5R1F6 Gm7712-202ENSMUST00000222331 1510 ntBASIC14.61□□□□□ -0.07
Trav5d-4Q5R1F6 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav5d-4Q5R1F6 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav5d-4Q5R1F6 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav5d-4Q5R1F6 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC14.6□□□□□ -0.07
Trav5d-4Q5R1F6 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav5d-4Q5R1F6 Tfap2a-209ENSMUST00000225180 1828 ntBASIC14.6□□□□□ -0.07
Trav5d-4Q5R1F6 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav5d-4Q5R1F6 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav5d-4Q5R1F6 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
Trav5d-4Q5R1F6 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav5d-4Q5R1F6 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Trav5d-4Q5R1F6 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC14.6□□□□□ -0.07
Trav5d-4Q5R1F6 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav5d-4Q5R1F6 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav5d-4Q5R1F6 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
Trav5d-4Q5R1F6 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
Trav5d-4Q5R1F6 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav5d-4Q5R1F6 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC14.6□□□□□ -0.07
Trav5d-4Q5R1F6 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav5d-4Q5R1F6 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav5d-4Q5R1F6 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav5d-4Q5R1F6 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav5d-4Q5R1F6 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav5d-4Q5R1F6 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC14.59□□□□□ -0.07
Trav5d-4Q5R1F6 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav5d-4Q5R1F6 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Trav5d-4Q5R1F6 Gm27011-201ENSMUST00000182352 972 ntBASIC14.59□□□□□ -0.07
Trav5d-4Q5R1F6 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav5d-4Q5R1F6 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Trav5d-4Q5R1F6 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC14.59□□□□□ -0.07
Trav5d-4Q5R1F6 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC14.59□□□□□ -0.07
Trav5d-4Q5R1F6 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.07
Trav5d-4Q5R1F6 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.07
Trav5d-4Q5R1F6 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.07
Trav5d-4Q5R1F6 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC14.58□□□□□ -0.07
Trav5d-4Q5R1F6 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Trav5d-4Q5R1F6 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Trav5d-4Q5R1F6 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
Trav5d-4Q5R1F6 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Trav5d-4Q5R1F6 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
Trav5d-4Q5R1F6 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC14.58□□□□□ -0.08
Trav5d-4Q5R1F6 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Trav5d-4Q5R1F6 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trav5d-4Q5R1F6 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trav5d-4Q5R1F6 AC153881.1-201ENSMUST00000214448 284 ntBASIC14.58□□□□□ -0.08
Trav5d-4Q5R1F6 AC154649.1-201ENSMUST00000227392 384 ntBASIC14.58□□□□□ -0.08
Trav5d-4Q5R1F6 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 38.9 ms