Protein–RNA interactions for Protein: Q5R1D2

Trav15-1-dv6-1, T cell receptor alpha variable 15-1-DV6-1 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15-1-dv6-1Q5R1D2 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trav15-1-dv6-1Q5R1D2 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Trav15-1-dv6-1Q5R1D2 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trav15-1-dv6-1Q5R1D2 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Trav15-1-dv6-1Q5R1D2 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trav15-1-dv6-1Q5R1D2 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Trav15-1-dv6-1Q5R1D2 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
Trav15-1-dv6-1Q5R1D2 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trav15-1-dv6-1Q5R1D2 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trav15-1-dv6-1Q5R1D2 Tfap2a-209ENSMUST00000225180 1828 ntBASIC13.27□□□□□ -0.29
Trav15-1-dv6-1Q5R1D2 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trav15-1-dv6-1Q5R1D2 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trav15-1-dv6-1Q5R1D2 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trav15-1-dv6-1Q5R1D2 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC13.27□□□□□ -0.29
Trav15-1-dv6-1Q5R1D2 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Trav15-1-dv6-1Q5R1D2 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav15-1-dv6-1Q5R1D2 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav15-1-dv6-1Q5R1D2 Dsg2-201ENSMUST00000059787 5766 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav15-1-dv6-1Q5R1D2 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav15-1-dv6-1Q5R1D2 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Trav15-1-dv6-1Q5R1D2 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC13.26□□□□□ -0.29
Trav15-1-dv6-1Q5R1D2 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav15-1-dv6-1Q5R1D2 Mir2861-201ENSMUST00000175539 82 ntBASIC13.26□□□□□ -0.29
Trav15-1-dv6-1Q5R1D2 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav15-1-dv6-1Q5R1D2 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Trav15-1-dv6-1Q5R1D2 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Trav15-1-dv6-1Q5R1D2 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav15-1-dv6-1Q5R1D2 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
Trav15-1-dv6-1Q5R1D2 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Trav15-1-dv6-1Q5R1D2 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav15-1-dv6-1Q5R1D2 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav15-1-dv6-1Q5R1D2 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav15-1-dv6-1Q5R1D2 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Trav15-1-dv6-1Q5R1D2 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav15-1-dv6-1Q5R1D2 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav15-1-dv6-1Q5R1D2 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Trav15-1-dv6-1Q5R1D2 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC13.25□□□□□ -0.29
Trav15-1-dv6-1Q5R1D2 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Trav15-1-dv6-1Q5R1D2 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Trav15-1-dv6-1Q5R1D2 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC13.25□□□□□ -0.29
Trav15-1-dv6-1Q5R1D2 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Trav15-1-dv6-1Q5R1D2 Gm19721-201ENSMUST00000195284 1764 ntBASIC13.25□□□□□ -0.29
Trav15-1-dv6-1Q5R1D2 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav15-1-dv6-1Q5R1D2 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav15-1-dv6-1Q5R1D2 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav15-1-dv6-1Q5R1D2 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Trav15-1-dv6-1Q5R1D2 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC13.25□□□□□ -0.29
Trav15-1-dv6-1Q5R1D2 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Trav15-1-dv6-1Q5R1D2 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Trav15-1-dv6-1Q5R1D2 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Trav15-1-dv6-1Q5R1D2 Gm13401-201ENSMUST00000117074 291 ntBASIC13.25□□□□□ -0.29
Trav15-1-dv6-1Q5R1D2 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Trav15-1-dv6-1Q5R1D2 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Trav15-1-dv6-1Q5R1D2 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC13.25□□□□□ -0.29
Trav15-1-dv6-1Q5R1D2 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav15-1-dv6-1Q5R1D2 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav15-1-dv6-1Q5R1D2 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav15-1-dv6-1Q5R1D2 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav15-1-dv6-1Q5R1D2 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav15-1-dv6-1Q5R1D2 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav15-1-dv6-1Q5R1D2 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav15-1-dv6-1Q5R1D2 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav15-1-dv6-1Q5R1D2 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav15-1-dv6-1Q5R1D2 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav15-1-dv6-1Q5R1D2 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav15-1-dv6-1Q5R1D2 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav15-1-dv6-1Q5R1D2 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav15-1-dv6-1Q5R1D2 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Trav15-1-dv6-1Q5R1D2 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav15-1-dv6-1Q5R1D2 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav15-1-dv6-1Q5R1D2 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC13.24□□□□□ -0.29
Trav15-1-dv6-1Q5R1D2 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC13.24□□□□□ -0.29
Trav15-1-dv6-1Q5R1D2 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav15-1-dv6-1Q5R1D2 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Trav15-1-dv6-1Q5R1D2 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav15-1-dv6-1Q5R1D2 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
Trav15-1-dv6-1Q5R1D2 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
Trav15-1-dv6-1Q5R1D2 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC13.24□□□□□ -0.29
Trav15-1-dv6-1Q5R1D2 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC13.24□□□□□ -0.29
Trav15-1-dv6-1Q5R1D2 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Trav15-1-dv6-1Q5R1D2 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav15-1-dv6-1Q5R1D2 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav15-1-dv6-1Q5R1D2 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Trav15-1-dv6-1Q5R1D2 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC13.24□□□□□ -0.29
Trav15-1-dv6-1Q5R1D2 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav15-1-dv6-1Q5R1D2 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC13.24□□□□□ -0.29
Trav15-1-dv6-1Q5R1D2 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav15-1-dv6-1Q5R1D2 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav15-1-dv6-1Q5R1D2 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Trav15-1-dv6-1Q5R1D2 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav15-1-dv6-1Q5R1D2 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav15-1-dv6-1Q5R1D2 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav15-1-dv6-1Q5R1D2 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav15-1-dv6-1Q5R1D2 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav15-1-dv6-1Q5R1D2 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav15-1-dv6-1Q5R1D2 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav15-1-dv6-1Q5R1D2 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Trav15-1-dv6-1Q5R1D2 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC13.23□□□□□ -0.29
Trav15-1-dv6-1Q5R1D2 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Trav15-1-dv6-1Q5R1D2 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 21.4 ms