Protein–RNA interactions for Protein: Q5H8C4

Vps13a, Vacuolar protein sorting-associated protein 13A, mousemouse

Predictions only

Length 3,166 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps13aQ5H8C4 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Vps13aQ5H8C4 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Vps13aQ5H8C4 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Vps13aQ5H8C4 Gm37194-201ENSMUST00000193092 3031 ntBASIC16.85■□□□□ 0.29
Vps13aQ5H8C4 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Vps13aQ5H8C4 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Vps13aQ5H8C4 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC16.85■□□□□ 0.29
Vps13aQ5H8C4 Dpm3-202ENSMUST00000107462 827 ntAPPRIS P1 TSL 3 BASIC16.85■□□□□ 0.29
Vps13aQ5H8C4 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC16.85■□□□□ 0.29
Vps13aQ5H8C4 AA465934-202ENSMUST00000176545 356 ntTSL 2 BASIC16.85■□□□□ 0.29
Vps13aQ5H8C4 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC16.85■□□□□ 0.29
Vps13aQ5H8C4 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Vps13aQ5H8C4 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Vps13aQ5H8C4 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Vps13aQ5H8C4 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Vps13aQ5H8C4 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC16.85■□□□□ 0.29
Vps13aQ5H8C4 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC16.85■□□□□ 0.29
Vps13aQ5H8C4 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
Vps13aQ5H8C4 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Vps13aQ5H8C4 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Vps13aQ5H8C4 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Vps13aQ5H8C4 Gm19721-201ENSMUST00000195284 1764 ntBASIC16.85■□□□□ 0.29
Vps13aQ5H8C4 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC16.84■□□□□ 0.29
Vps13aQ5H8C4 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
Vps13aQ5H8C4 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Vps13aQ5H8C4 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
Vps13aQ5H8C4 Fam126b-201ENSMUST00000038372 2385 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Vps13aQ5H8C4 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Vps13aQ5H8C4 Gm25990-201ENSMUST00000102440 86 ntBASIC16.84■□□□□ 0.29
Vps13aQ5H8C4 Gm15173-201ENSMUST00000122049 433 ntBASIC16.84■□□□□ 0.29
Vps13aQ5H8C4 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC16.84■□□□□ 0.29
Vps13aQ5H8C4 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Vps13aQ5H8C4 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Vps13aQ5H8C4 Esd-207ENSMUST00000176957 1117 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Vps13aQ5H8C4 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Vps13aQ5H8C4 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC16.84■□□□□ 0.29
Vps13aQ5H8C4 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Vps13aQ5H8C4 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Vps13aQ5H8C4 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Vps13aQ5H8C4 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Vps13aQ5H8C4 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC16.84■□□□□ 0.29
Vps13aQ5H8C4 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Vps13aQ5H8C4 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Vps13aQ5H8C4 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Vps13aQ5H8C4 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Vps13aQ5H8C4 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC16.83■□□□□ 0.29
Vps13aQ5H8C4 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
Vps13aQ5H8C4 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC16.83■□□□□ 0.29
Vps13aQ5H8C4 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.29
Vps13aQ5H8C4 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.29
Vps13aQ5H8C4 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Vps13aQ5H8C4 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Vps13aQ5H8C4 Gm14701-201ENSMUST00000117156 348 ntBASIC16.83■□□□□ 0.28
Vps13aQ5H8C4 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Vps13aQ5H8C4 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Vps13aQ5H8C4 Ing4-201ENSMUST00000032480 1629 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Vps13aQ5H8C4 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Vps13aQ5H8C4 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Vps13aQ5H8C4 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Vps13aQ5H8C4 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC16.83■□□□□ 0.28
Vps13aQ5H8C4 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC16.83■□□□□ 0.28
Vps13aQ5H8C4 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC16.83■□□□□ 0.28
Vps13aQ5H8C4 AC090659.1-201ENSMUST00000224334 768 ntBASIC16.83■□□□□ 0.28
Vps13aQ5H8C4 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Vps13aQ5H8C4 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Vps13aQ5H8C4 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Vps13aQ5H8C4 Mir6956-201ENSMUST00000183598 62 ntBASIC16.82■□□□□ 0.28
Vps13aQ5H8C4 Gm6550-201ENSMUST00000187574 993 ntBASIC16.82■□□□□ 0.28
Vps13aQ5H8C4 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Vps13aQ5H8C4 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC16.82■□□□□ 0.28
Vps13aQ5H8C4 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Vps13aQ5H8C4 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Vps13aQ5H8C4 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Vps13aQ5H8C4 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Vps13aQ5H8C4 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Vps13aQ5H8C4 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Vps13aQ5H8C4 Mymx-202ENSMUST00000169137 616 ntAPPRIS P4 TSL 2 BASIC16.82■□□□□ 0.28
Vps13aQ5H8C4 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC16.82■□□□□ 0.28
Vps13aQ5H8C4 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Vps13aQ5H8C4 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Vps13aQ5H8C4 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC16.82■□□□□ 0.28
Vps13aQ5H8C4 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Vps13aQ5H8C4 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Vps13aQ5H8C4 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Vps13aQ5H8C4 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Vps13aQ5H8C4 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Vps13aQ5H8C4 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Vps13aQ5H8C4 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Vps13aQ5H8C4 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Vps13aQ5H8C4 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Vps13aQ5H8C4 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
Vps13aQ5H8C4 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Vps13aQ5H8C4 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Vps13aQ5H8C4 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Vps13aQ5H8C4 Trnt1-203ENSMUST00000113248 1398 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Vps13aQ5H8C4 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
Vps13aQ5H8C4 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Vps13aQ5H8C4 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC16.81■□□□□ 0.28
Vps13aQ5H8C4 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC16.81■□□□□ 0.28
Vps13aQ5H8C4 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC16.81■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 48.8 ms