Protein–RNA interactions for Protein: Q3UP24

Nlrc4, NLR family CARD domain-containing protein 4, mousemouse

Predictions only

Length 1,024 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nlrc4Q3UP24 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Nlrc4Q3UP24 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Nlrc4Q3UP24 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Nlrc4Q3UP24 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Nlrc4Q3UP24 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC17.91■□□□□ 0.46
Nlrc4Q3UP24 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC17.91■□□□□ 0.46
Nlrc4Q3UP24 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Nlrc4Q3UP24 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
Nlrc4Q3UP24 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
Nlrc4Q3UP24 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Nlrc4Q3UP24 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Nlrc4Q3UP24 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC17.9■□□□□ 0.46
Nlrc4Q3UP24 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Nlrc4Q3UP24 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Nlrc4Q3UP24 AC121577.1-201ENSMUST00000227302 707 ntBASIC17.9■□□□□ 0.46
Nlrc4Q3UP24 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Nlrc4Q3UP24 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Nlrc4Q3UP24 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC17.9■□□□□ 0.46
Nlrc4Q3UP24 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Nlrc4Q3UP24 Ddx41-204ENSMUST00000224765 2199 ntBASIC17.9■□□□□ 0.46
Nlrc4Q3UP24 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Nlrc4Q3UP24 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC17.9■□□□□ 0.46
Nlrc4Q3UP24 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
Nlrc4Q3UP24 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
Nlrc4Q3UP24 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
Nlrc4Q3UP24 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
Nlrc4Q3UP24 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
Nlrc4Q3UP24 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Nlrc4Q3UP24 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Nlrc4Q3UP24 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC17.89■□□□□ 0.45
Nlrc4Q3UP24 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Nlrc4Q3UP24 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Nlrc4Q3UP24 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC17.89■□□□□ 0.45
Nlrc4Q3UP24 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC17.89■□□□□ 0.45
Nlrc4Q3UP24 Gm18032-201ENSMUST00000222541 538 ntBASIC17.89■□□□□ 0.45
Nlrc4Q3UP24 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC17.89■□□□□ 0.45
Nlrc4Q3UP24 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Nlrc4Q3UP24 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
Nlrc4Q3UP24 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Nlrc4Q3UP24 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Nlrc4Q3UP24 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Nlrc4Q3UP24 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Nlrc4Q3UP24 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Nlrc4Q3UP24 Gm43338-201ENSMUST00000198617 2223 ntBASIC17.88■□□□□ 0.45
Nlrc4Q3UP24 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Nlrc4Q3UP24 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
Nlrc4Q3UP24 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Nlrc4Q3UP24 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC17.88■□□□□ 0.45
Nlrc4Q3UP24 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Nlrc4Q3UP24 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC17.88■□□□□ 0.45
Nlrc4Q3UP24 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC17.88■□□□□ 0.45
Nlrc4Q3UP24 Gm3272-201ENSMUST00000181181 1229 ntBASIC17.88■□□□□ 0.45
Nlrc4Q3UP24 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC17.88■□□□□ 0.45
Nlrc4Q3UP24 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Nlrc4Q3UP24 Gm10566-201ENSMUST00000086739 996 ntBASIC17.88■□□□□ 0.45
Nlrc4Q3UP24 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Nlrc4Q3UP24 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
Nlrc4Q3UP24 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
Nlrc4Q3UP24 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Nlrc4Q3UP24 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Nlrc4Q3UP24 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Nlrc4Q3UP24 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Nlrc4Q3UP24 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
Nlrc4Q3UP24 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Nlrc4Q3UP24 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC17.88■□□□□ 0.45
Nlrc4Q3UP24 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Nlrc4Q3UP24 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
Nlrc4Q3UP24 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Nlrc4Q3UP24 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Nlrc4Q3UP24 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Nlrc4Q3UP24 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Nlrc4Q3UP24 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Nlrc4Q3UP24 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Nlrc4Q3UP24 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC17.87■□□□□ 0.45
Nlrc4Q3UP24 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
Nlrc4Q3UP24 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC17.87■□□□□ 0.45
Nlrc4Q3UP24 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Nlrc4Q3UP24 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Nlrc4Q3UP24 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Nlrc4Q3UP24 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Nlrc4Q3UP24 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC17.87■□□□□ 0.45
Nlrc4Q3UP24 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
Nlrc4Q3UP24 Gm7213-201ENSMUST00000215977 950 ntBASIC17.87■□□□□ 0.45
Nlrc4Q3UP24 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
Nlrc4Q3UP24 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Nlrc4Q3UP24 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Nlrc4Q3UP24 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Nlrc4Q3UP24 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Nlrc4Q3UP24 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Nlrc4Q3UP24 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Nlrc4Q3UP24 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Nlrc4Q3UP24 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
Nlrc4Q3UP24 Gm43294-201ENSMUST00000202850 2490 ntBASIC17.86■□□□□ 0.45
Nlrc4Q3UP24 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Nlrc4Q3UP24 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC17.86■□□□□ 0.45
Nlrc4Q3UP24 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC17.86■□□□□ 0.45
Nlrc4Q3UP24 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Nlrc4Q3UP24 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Nlrc4Q3UP24 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Nlrc4Q3UP24 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 21.2 ms